Revisiting an important component of plant genomes: microsatellites
C Gao, X Ren, AS Mason, J Li, W Wang… - Functional Plant …, 2013 - CSIRO Publishing
Microsatellites are some of the most highly variable repetitive DNA tracts in genomes. Few
studies focus on whether the characteristic instability of microsatellites is linked to …
studies focus on whether the characteristic instability of microsatellites is linked to …
In silicocomparative analysis of SSR markers in plants
Background The adverse environmental conditions impose extreme limitation to growth and
plant development, restricting the genetic potential and reflecting on plant yield losses. The …
plant development, restricting the genetic potential and reflecting on plant yield losses. The …
Transcriptome Analysis in Sheepgrass (Leymus chinensis): A Dominant Perennial Grass of the Eurasian Steppe
S Chen, X Huang, X Yan, Y Liang, Y Wang, X Li… - PloS one, 2013 - journals.plos.org
Background Sheepgrass [Leymus chinensis (Trin.) Tzvel.] is an important perennial forage
grass across the Eurasian Steppe and is known for its adaptability to various environmental …
grass across the Eurasian Steppe and is known for its adaptability to various environmental …
Single-nucleotide polymorphism markers from de-novo assembly of the pomegranate transcriptome reveal germplasm genetic diversity
Pomegranate is a valuable crop that is grown commercially in many parts of the world. Wild
species have been reported from India, Turkmenistan and Socotra. Pomegranate fruit has a …
species have been reported from India, Turkmenistan and Socotra. Pomegranate fruit has a …
Genome Wide Characterization of Short Tandem Repeat Markers in Sweet Orange (Citrus sinensis)
Sweet orange (Citrus sinensis) is one of the major cultivated and most-consumed citrus
species. With the goal of enhancing the genomic resources in citrus, we surveyed …
species. With the goal of enhancing the genomic resources in citrus, we surveyed …
Genome-wide identification and characterization of functionally relevant microsatellite markers from transcription factor genes of Tea (Camellia sinensis (L.) O. Kuntze …
Tea, being one of the most popular beverages requires large set of molecular markers for
genetic improvement of quality, yield and stress tolerance. Identification of functionally …
genetic improvement of quality, yield and stress tolerance. Identification of functionally …
[HTML][HTML] Comprehensive identification and characterization of simple sequence repeats based on the whole-genome sequences of 14 forest and fruit trees
X Song, N Li, Y Guo, Y Bai, T Wu, T Yu, S Feng… - Forestry …, 2021 - maxapress.com
Simple sequence repeats (SSRs) are popular and important molecular markers that exist
widely in plants. Here, we conducted a comprehensive identification and comparative …
widely in plants. Here, we conducted a comprehensive identification and comparative …
Genome-wide analysis of tandem repeats in plants and green algae
Z Zhao, C Guo, S Sutharzan, P Li… - G3: Genes …, 2014 - academic.oup.com
Tandem repeats (TRs) extensively exist in the genomes of prokaryotes and eukaryotes.
Based on the sequenced genomes and gene annotations of 31 plant and algal species in …
Based on the sequenced genomes and gene annotations of 31 plant and algal species in …
Assessment of Functional EST‐SSR Markers (Sugarcane) in Cross‐Species Transferability, Genetic Diversity among Poaceae Plants, and Bulk Segregation Analysis
Expressed sequence tags (ESTs) are important resource for gene discovery, gene
expression and its regulation, molecular marker development, and comparative genomics …
expression and its regulation, molecular marker development, and comparative genomics …
An empirical analysis of mtSSRs: could microsatellite distribution patterns explain the evolution of mitogenomes in plants?
KEJ de Freitas, C Busanello, VE Viana… - Functional & Integrative …, 2022 - Springer
Microsatellites (SSRs) are tandem repeat sequences in eukaryote genomes, including plant
cytoplasmic genomes. The mitochondrial genome (mtDNA) has been shown to vary in size …
cytoplasmic genomes. The mitochondrial genome (mtDNA) has been shown to vary in size …