Network motifs: theory and experimental approaches

U Alon - Nature Reviews Genetics, 2007 - nature.com
Transcription regulation networks control the expression of genes. The transcription
networks of well-studied microorganisms appear to be made up of a small set of recurring …

Exploiting the PI3K/AKT pathway for cancer drug discovery

BT Hennessy, DL Smith, PT Ram, Y Lu… - Nature reviews Drug …, 2005 - nature.com
Evolving studies with several different targeted therapeutic agents are demonstrating that
patients with genomic alterations of the target, including amplification, translocation and …

Enrichr-KG: bridging enrichment analysis across multiple libraries

JE Evangelista, Z Xie, GB Marino… - Nucleic acids …, 2023 - academic.oup.com
Gene and protein set enrichment analysis is a critical step in the analysis of data collected
from omics experiments. Enrichr is a popular gene set enrichment analysis web-server …

[图书][B] An introduction to systems biology: design principles of biological circuits

U Alon - 2019 - api.taylorfrancis.com
Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

Scale-free networks in cell biology

R Albert - Journal of cell science, 2005 - journals.biologists.com
A cell's behavior is a consequence of the complex interactions between its numerous
constituents, such as DNA, RNA, proteins and small molecules. Cells use signaling …

Network analyses in systems pharmacology

SI Berger, R Iyengar - Bioinformatics, 2009 - academic.oup.com
Abstract Systems pharmacology is an emerging area of pharmacology which utilizes
network analysis of drug action as one of its approaches. By considering drug actions and …

Oscillations and variability in the p53 system

N Geva‐Zatorsky, N Rosenfeld, S Itzkovitz… - Molecular systems …, 2006 - embopress.org
Understanding the dynamics and variability of protein circuitry requires accurate
measurements in living cells as well as theoretical models. To address this, we employed …

A directed protein interaction network for investigating intracellular signal transduction

A Vinayagam, U Stelzl, R Foulle, S Plassmann… - Science …, 2011 - science.org
Cellular signal transduction is a complex process involving protein-protein interactions
(PPIs) that transmit information. For example, signals from the plasma membrane may be …

Dynamic reconfigurable DNA nanostructures, networks and materials

J Wang, Z Li, I Willner - Angewandte Chemie, 2023 - Wiley Online Library
DNA nanotechnology relies on the structural and functional information encoded in nucleic
acids. Specifically, the sequence‐guided reconfiguration of nucleic acids by auxiliary …

Mutation of SHOC2 promotes aberrant protein N-myristoylation and causes Noonan-like syndrome with loose anagen hair

V Cordeddu, E Di Schiavi, LA Pennacchio, A Ma'ayan… - Nature …, 2009 - nature.com
N-myristoylation is a common form of co-translational protein fatty acylation resulting from
the attachment of myristate to a required N-terminal glycine residue,. We show that …