[HTML][HTML] How genomics can help biodiversity conservation

K Theissinger, C Fernandes, G Formenti, I Bista… - Trends in Genetics, 2023 - cell.com
The availability of public genomic resources can greatly assist biodiversity assessment,
conservation, and restoration efforts by providing evidence for scientifically informed …

Structural variants and speciation: multiple processes at play

EL Berdan, TG Aubier, S Cozzolino… - Cold Spring …, 2024 - cshperspectives.cshlp.org
Research on the genomic architecture of speciation has increasingly revealed the
importance of structural variants (SVs) that affect the presence, abundance, position, and/or …

The Chicken Pan-Genome Reveals Gene Content Variation and a Promoter Region Deletion in IGF2BP1 Affecting Body Size

K Wang, H Hu, Y Tian, J Li, A Scheben… - Molecular biology …, 2021 - academic.oup.com
Domestication and breeding have reshaped the genomic architecture of chicken, but the
retention and loss of genomic elements during these evolutionary processes remain …

A review of the pangenome: how it affects our understanding of genomic variation, selection and breeding in domestic animals?

Y Gong, Y Li, X Liu, Y Ma, L Jiang - Journal of Animal Science and …, 2023 - Springer
As large-scale genomic studies have progressed, it has been revealed that a single
reference genome pattern cannot represent genetic diversity at the species level. While …

Recent advances in crustacean genomics and their potential application in aquaculture

J Yuan, Y Yu, X Zhang, S Li, J Xiang… - Reviews in …, 2023 - Wiley Online Library
Genomic resources are increasingly being used to improve the production efficiency and
profitability of aquaculture. Crustaceans are a large group of invertebrates that …

Bivalves present the largest and most diversified repertoire of toll-like receptors in the animal kingdom, suggesting broad-spectrum pathogen recognition in marine …

A Saco, B Novoa, S Greco, M Gerdol… - Molecular Biology and …, 2023 - academic.oup.com
Toll-like receptors (TLRs) are the most widespread class of membrane-bound innate
immune receptors, responsible of specific pathogen recognition and production of immune …

Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia

JL Yang, DD Feng, J Liu, JK Xu, K Chen, YF Li… - …, 2021 - academic.oup.com
Background The hard-shelled mussel (Mytilus coruscus) is widely distributed in the
temperate seas of East Asia and is an important commercial bivalve in China. Chromosome …

Immunological responses of marine bivalves to contaminant exposure: contribution of the-omics approach

T Balbi, M Auguste, C Ciacci, L Canesi - Frontiers in Immunology, 2021 - frontiersin.org
The increasing number of data studies on the biological impact of anthropogenic chemicals
in the marine environment, together with the great development of invertebrate immunology …

Transcriptomic Response of Mussel Gills After a Vibrio splendidus Infection Demonstrates Their Role in the Immune Response

A Saco, M Rey-Campos, B Novoa… - Frontiers in …, 2020 - frontiersin.org
Mussels (Mytilus galloprovincialis) are filter feeder bivalves that are constantly in contact
with a wide range of microorganisms, some of which are potentially pathogenic. How …

The changing face of genome assemblies: Guidance on achieving high‐quality reference genomes

A Whibley, JL Kelley, SR Narum - 2021 - Wiley Online Library
The quality of genome assemblies has improved rapidly in recent years due to continual
advances in sequencing technology, assembly approaches, and quality control. In the field …