Chromatin structure and epigenetics

AS Quina, M Buschbeck, L Di Croce - Biochemical pharmacology, 2006 - Elsevier
In eukaryotic cells, the DNA molecule is found in the form of a nucleoprotein complex named
chromatin. The basic unit of the chromatin is the nucleosome, which comprises 147 base …

Proteomic identification of protein ubiquitination events

G Xu, SR Jaffrey - Biotechnology and Genetic Engineering …, 2013 - Taylor & Francis
Protein ubiquitination is an important post-translational modification that regulates almost
every aspect of cellular function and many cell signaling pathways in eukaryotes. Alterations …

[图书][B] A handbook of derivatives for mass spectrometry

V Zaikin, JM Halket - 2009 - books.google.com
Chemical derivatisation of functional groups has proved popular since the beginning of
organic mass spectrometry as a means to enhance the stability and volatility of the analytes …

[PDF][PDF] Ube2w and ataxin-3 coordinately regulate the ubiquitin ligase CHIP

KM Scaglione, E Zavodszky, SV Todi, S Patury, P Xu… - Molecular cell, 2011 - cell.com
The mechanisms by which ubiquitin ligases are regulated remain poorly understood. Here
we describe a series of molecular events that coordinately regulate CHIP, a neuroprotective …

Two different classes of E2 ubiquitin-conjugating enzymes are required for the mono-ubiquitination of proteins and elongation by polyubiquitin chains with a specific …

M Windheim, M Peggie, P Cohen - Biochemical Journal, 2008 - portlandpress.com
RING (really interesting new gene) and U-box E3 ligases bridge E2 ubiquitin-conjugating
enzymes and substrates to enable the transfer of ubiquitin to a lysine residue on the …

Available versus digestible dietary amino acids

SM Rutherfurd, PJ Moughan - British Journal of Nutrition, 2012 - cambridge.org
Available amino acids are those absorbed from the gastrointestinal tract in a form suitable
for body protein synthesis. True ileal digestible amino acids are determined based on the …

E2 conjugating enzyme selectivity and requirements for function of the E3 ubiquitin ligase CHIP

SE Soss, Y Yue, S Dhe-Paganon, WJ Chazin - Journal of Biological …, 2011 - ASBMB
The transfer of ubiquitin (Ub) to a substrate protein requires a cascade of E1 activating, E2
conjugating, and E3 ligating enzymes. E3 Ub ligases containing U-box and RING domains …

MS/MS simplification by 355 nm ultraviolet photodissociation of chromophore-derivatized peptides in a quadrupole ion trap

JJ Wilson, JS Brodbelt - Analytical chemistry, 2007 - ACS Publications
Ultraviolet photodissociation (UVPD) of chromophore-modified peptides enhances the
capabilities for de novo sequencing in a quadrupole ion trap mass spectrometer. Attachment …

Insights into the conformational dynamics of the E3 ubiquitin ligase CHIP in complex with chaperones and E2 enzymes

C Graf, M Stankiewicz, R Nikolay, MP Mayer - Biochemistry, 2010 - ACS Publications
The dimeric E3 ubiquitin ligase CHIP binds with its tetratricopeptide repeat (TPR) domain
the C-terminus of molecular chaperones Hsp70 and Hsp90 and with its U-box region E2 …

Targeted mass spectrometric strategy for global mapping of ubiquitination on proteins

S Mollah, IE Wertz, Q Phung, D Arnott… - … Journal Devoted to …, 2007 - Wiley Online Library
Post‐translational modifications of proteins including phosphorylation, glycosylation,
acetylation and ubiquitination facilitate the regulation of many cellular processes and …