The molecular principles of gene regulation by Polycomb repressive complexes

NP Blackledge, RJ Klose - Nature reviews Molecular cell biology, 2021 - nature.com
Precise control of gene expression is fundamental to cell function and development.
Although ultimately gene expression relies on DNA-binding transcription factors to guide the …

New insights into genome folding by loop extrusion from inducible degron technologies

E de Wit, EP Nora - Nature Reviews Genetics, 2023 - nature.com
Chromatin folds into dynamic loops that often span hundreds of kilobases and physically
wire distant loci together for gene regulation. These loops are continuously created …

WAPL maintains a cohesin loading cycle to preserve cell-type-specific distal gene regulation

NQ Liu, M Maresca, T van den Brand, L Braccioli… - Nature …, 2021 - nature.com
The cohesin complex has an essential role in maintaining genome organization. However,
its role in gene regulation remains largely unresolved. Here we report that the cohesin …

[HTML][HTML] Cohesin disrupts polycomb-dependent chromosome interactions in embryonic stem cells

JDP Rhodes, A Feldmann, B Hernández-Rodríguez… - Cell reports, 2020 - cell.com
How chromosome organization is related to genome function remains poorly understood.
Cohesin, loop extrusion, and CCCTC-binding factor (CTCF) have been proposed to create …

Hi-C analyses with GENOVA: a case study with cohesin variants

RH van der Weide, T van den Brand… - NAR genomics and …, 2021 - academic.oup.com
Conformation capture-approaches like Hi-C can elucidate chromosome structure at a
genome-wide scale. Hi-C datasets are large and require specialised software. Here, we …

[HTML][HTML] ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL

G Wutz, R Ladurner, BG St Hilaire, RR Stocsits… - Elife, 2020 - elifesciences.org
Eukaryotic genomes are folded into loops. It is thought that these are formed by cohesin
complexes via extrusion, either until loop expansion is arrested by CTCF or until cohesin is …

[HTML][HTML] STAG2 loss rewires oncogenic and developmental programs to promote metastasis in Ewing sarcoma

B Adane, G Alexe, BKA Seong, D Lu, EE Hwang… - Cancer cell, 2021 - cell.com
The core cohesin subunit STAG2 is recurrently mutated in Ewing sarcoma but its biological
role is less clear. Here, we demonstrate that cohesin complexes containing STAG2 occupy …

[HTML][HTML] NIPBL and cohesin: new take on a classic tale

D Alonso-Gil, A Losada - Trends in Cell Biology, 2023 - cell.com
Cohesin folds the genome in dynamic chromatin loops and holds the sister chromatids
together. NIPBL Scc2 is currently considered the cohesin loader, a role that may need …

[HTML][HTML] Enhancer–promoter specificity in gene transcription: molecular mechanisms and disease associations

MJ Friedman, T Wagner, H Lee… - … & Molecular Medicine, 2024 - nature.com
Although often located at a distance from their target gene promoters, enhancers are the
primary genomic determinants of temporal and spatial transcriptional specificity in …

Emerging themes in cohesin cancer biology

T Waldman - Nature Reviews Cancer, 2020 - nature.com
Mutations of the cohesin complex in human cancer were first discovered~ 10 years ago.
Since then, researchers worldwide have demonstrated that cohesin is among the most …