Transcriptomics for clinical and experimental biology research: hang on a seq
Sequencing the human genome empowers translational medicine, facilitating transcriptome‐
wide molecular diagnosis, pathway biology, and drug repositioning. Initially, microarrays are …
wide molecular diagnosis, pathway biology, and drug repositioning. Initially, microarrays are …
Setting the clock of neural progenitor cells during mammalian corticogenesis
Radial glial cells (RGCs) as primary neural stem cells in the developing mammalian cortex
give rise to diverse types of neurons and glial cells according to sophisticated …
give rise to diverse types of neurons and glial cells according to sophisticated …
Epitranscriptomic regulation of cortical neurogenesis via Mettl8-dependent mitochondrial tRNA m3C modification
Increasing evidence implicates the critical roles of various epitranscriptomic RNA
modifications in different biological processes. Methyltransferase METTL8 installs 3 …
modifications in different biological processes. Methyltransferase METTL8 installs 3 …
Mapping medically relevant RNA isoform diversity in the aged human frontal cortex with deep long-read RNA-seq
B Aguzzoli Heberle, JA Brandon, ML Page… - Nature …, 2024 - nature.com
Determining whether the RNA isoforms from medically relevant genes have distinct
functions could facilitate direct targeting of RNA isoforms for disease treatment. Here, as a …
functions could facilitate direct targeting of RNA isoforms for disease treatment. Here, as a …
[HTML][HTML] Using deep long-read RNAseq in Alzheimer's disease brain to assess medical relevance of RNA isoform diversity
BA Heberle, JA Brandon, ML Page, KA Nations… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Due to alternative splicing, human protein-coding genes average over eight RNA isoforms,
resulting in nearly four distinct protein coding sequences per gene. Long-read RNAseq …
resulting in nearly four distinct protein coding sequences per gene. Long-read RNAseq …
Nanopore sequencing unveils the complexity of the cold-activated murine brown adipose tissue transcriptome
Alternative transcription increases transcriptome complexity by expression of multiple
transcripts per gene. Annotation and quantification of transcripts using short-read …
transcripts per gene. Annotation and quantification of transcripts using short-read …
Environmental community transcriptomics: strategies and struggles
J Mante, KE Groover, RM Pullen - Briefings in Functional …, 2024 - academic.oup.com
Transcriptomics is the study of RNA transcripts, the portion of the genome that is transcribed,
in a specific cell, tissue, or organism. Transcriptomics provides insight into gene expression …
in a specific cell, tissue, or organism. Transcriptomics provides insight into gene expression …
ScanExitronLR: characterization and quantification of exitron splicing events in long-read RNA-seq data
Exitron splicing is a type of alternative splicing where coding sequences are spliced out.
Recently, exitron splicing has been shown to increase proteome plasticity and play a role in …
Recently, exitron splicing has been shown to increase proteome plasticity and play a role in …
[HTML][HTML] Transcriptome identification of differential mammary genes of Kazakh horses during early pregnancy
W Ren, J Wang, Y Zeng, T Wang, J Meng, X Yao - Gene, 2024 - Elsevier
Kazakh mares have attracted widespread attention with their outstanding lactation traits.
Lactation is a complex dynamic process regulated by multiple factors. The extensive …
Lactation is a complex dynamic process regulated by multiple factors. The extensive …
Identification of multi-cancer risk genes
IS Mendoza Rivera - 2024 - eprints.qut.edu.au
Cancer is the second main cause of death in the world, and genetic variation influences a
large proportion of its risk. This thesis combined GWAS, 3D chromatin organisation and …
large proportion of its risk. This thesis combined GWAS, 3D chromatin organisation and …