Lake sedimentary DNA research on past terrestrial and aquatic biodiversity: Overview and recommendations
The use of lake sedimentary DNA to track the long-term changes in both terrestrial and
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …
Environmental DNA time series in ecology
Ecological communities change in time and space, but long-term dynamics at the century-to-
millennia scale are poorly documented due to lack of relevant data sets. Nevertheless …
millennia scale are poorly documented due to lack of relevant data sets. Nevertheless …
Transitory microbial habitat in the hyperarid Atacama Desert
D Schulze-Makuch, D Wagner… - Proceedings of the …, 2018 - National Acad Sciences
Traces of life are nearly ubiquitous on Earth. However, a central unresolved question is
whether these traces always indicate an active microbial community or whether, in extreme …
whether these traces always indicate an active microbial community or whether, in extreme …
New insights on lake sediment DNA from the catchment: Importance of taphonomic and analytical issues on the record quality
Over the last decade, an increasing number of studies have used lake sediment DNA to
trace past landscape changes, agricultural activities or human presence. However, the …
trace past landscape changes, agricultural activities or human presence. However, the …
Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential
In‐depth knowledge about spatial and temporal variation in microbial diversity and function
is needed for a better understanding of ecological and evolutionary responses to global …
is needed for a better understanding of ecological and evolutionary responses to global …
Vertical diversity and association pattern of total, abundant and rare microbial communities in deep‐sea sediments
Microbial abundance and community composition in marine sediments have been widely
explored. However, high‐resolution vertical changes of benthic microbial diversity and co …
explored. However, high‐resolution vertical changes of benthic microbial diversity and co …
Factors governing extracellular DNA degradation dynamics in soil
SH Sirois, DH Buckley - Environmental microbiology reports, 2019 - Wiley Online Library
We examined the impacts of soil moisture, temperature, agricultural management and
habitat type on the degradation dynamics of eDNA in soils. Synthetic eDNA was added to …
habitat type on the degradation dynamics of eDNA in soils. Synthetic eDNA was added to …
Extracellular DNA in environmental samples: Occurrence, extraction, quantification, and impact on microbial biodiversity assessment
Environmental DNA, ie, DNA extracted directly from environmental samples, has been used
to understand microbial communities in the environment and to monitor contemporary …
to understand microbial communities in the environment and to monitor contemporary …
Effects of microbial activity and environmental parameters on the degradation of extracellular environmental DNA from a eutrophic lake
Extracellular DNA (exDNA) pool in aquatic environments is a valuable source for
biomonitoring and bioassessment. However, degradation under particular environmental …
biomonitoring and bioassessment. However, degradation under particular environmental …
Genomic reconstruction of fossil and living microorganisms in ancient Siberian permafrost
Abstract Background Total DNA (intracellular, iDNA and extracellular, eDNA) from ancient
permafrost records the mixed genetic repository of the past and present microbial …
permafrost records the mixed genetic repository of the past and present microbial …