Cross-linking mass spectrometry: methods and applications in structural, molecular and systems biology
FJ O'Reilly, J Rappsilber - Nature structural & molecular biology, 2018 - nature.com
Over the past decade, cross-linking mass spectrometry (CLMS) has developed into a robust
and flexible tool that provides medium-resolution structural information. CLMS data provide …
and flexible tool that provides medium-resolution structural information. CLMS data provide …
Cross‐linking/mass spectrometry for studying protein structures and protein–protein interactions: where are we now and where should we go from here?
A Sinz - Angewandte Chemie International Edition, 2018 - Wiley Online Library
Structural mass spectrometry (MS) is gaining increasing importance for deriving valuable
three‐dimensional structural information on proteins and protein complexes, and it …
three‐dimensional structural information on proteins and protein complexes, and it …
[HTML][HTML] Anatomy of a crosslinker
A Belsom, J Rappsilber - Current opinion in chemical biology, 2021 - Elsevier
Crosslinking mass spectrometry has become a core technology in structural biology and is
expanding its reach towards systems biology. Its appeal lies in a rapid workflow, high …
expanding its reach towards systems biology. Its appeal lies in a rapid workflow, high …
Protein tertiary structure by crosslinking/mass spectrometry
Observing the structures of proteins within the cell and tracking structural changes under
different cellular conditions are the ultimate challenges for structural biology. This, however …
different cellular conditions are the ultimate challenges for structural biology. This, however …
Carboxyl-photo-reactive MS-cleavable cross-linkers: unveiling a hidden aspect of diazirine-based reagents
C Iacobucci, M Götze, C Piotrowski, C Arlt… - Analytical …, 2018 - ACS Publications
A major challenge in cross-linking/mass spectrometry (MS) is targeting carboxyl functions in
proteins under physiological conditions that do not disturb the protein's conformation. Cross …
proteins under physiological conditions that do not disturb the protein's conformation. Cross …
Chemical cross-linking in the structural analysis of protein assemblies
For decades, chemical cross-linking of proteins has been an established method to study
protein interaction partners. The chemical cross-linking approach has recently been revived …
protein interaction partners. The chemical cross-linking approach has recently been revived …
Assessment of chemical‐crosslink‐assisted protein structure modeling in CASP13
With the advance of experimental procedures obtaining chemical crosslinking information is
becoming a fast and routine practice. Information on crosslinks can greatly enhance the …
becoming a fast and routine practice. Information on crosslinks can greatly enhance the …
In-search assignment of monoisotopic peaks improves the identification of cross-linked peptides
Cross-linking/mass spectrometry has undergone a maturation process akin to standard
proteomics by adapting key methods such as false discovery rate control and quantification …
proteomics by adapting key methods such as false discovery rate control and quantification …
Small angle X‐ray scattering and cross‐linking for data assisted protein structure prediction in CASP 12 with prospects for improved accuracy
TL Ogorzalek, GL Hura, A Belsom… - PROTEINS: structure …, 2018 - Wiley Online Library
Experimental data offers empowering constraints for structure prediction. These constraints
can be used to filter equivalently scored models or more powerfully within optimization …
can be used to filter equivalently scored models or more powerfully within optimization …
Free radical‐initiated peptide sequencing (FRIPS)‐based cross‐linkers for improved peptide and protein structure analysis
Free radical‐initiated peptide sequencing (FRIPS) has recently been introduced as an
analytical strategy to create peptide radical ions in a predictable and effective way by …
analytical strategy to create peptide radical ions in a predictable and effective way by …