[HTML][HTML] Recent advances in understanding mitochondrial genome diversity

R Zardoya - F1000Research, 2020 - ncbi.nlm.nih.gov
Ever since its discovery, the double-stranded DNA contained in the mitochondria of
eukaryotes has fascinated researchers because of its bacterial endosymbiotic origin, crucial …

[HTML][HTML] Review of the algal biology program within the National Alliance for Advanced Biofuels and Bioproducts

CJ Unkefer, RT Sayre, JK Magnuson, DB Anderson… - Algal research, 2017 - Elsevier
Abstract In 2010, when the National Alliance for Advanced Biofuels and Bioproducts
(NAABB) consortium began, little was known about the molecular basis of algal biomass or …

Tiara: deep learning-based classification system for eukaryotic sequences

M Karlicki, S Antonowicz, A Karnkowska - Bioinformatics, 2022 - academic.oup.com
Motivation With a large number of metagenomic datasets becoming available, eukaryotic
metagenomics emerged as a new challenge. The proper classification of eukaryotic nuclear …

[HTML][HTML] Divergent copies of the large inverted repeat in the chloroplast genomes of ulvophycean green algae

M Turmel, C Otis, C Lemieux - Scientific Reports, 2017 - nature.com
The chloroplast genomes of many algae and almost all land plants carry two identical copies
of a large inverted repeat (IR) sequence that can pair for flip-flop recombination and undergo …

[HTML][HTML] Rappemonads are haptophyte phytoplankton

M Kawachi, T Nakayama, M Kayama, M Nomura… - Current Biology, 2021 - cell.com
Rapidly accumulating genetic data from environmental sequencing approaches have
revealed an extraordinary level of unsuspected diversity within marine phytoplankton, 1–11 …

[HTML][HTML] Genome Sequence and Transcriptome Analyses of Chrysochromulina tobin: Metabolic Tools for Enhanced Algal Fitness in the Prominent Order …

BT Hovde, CR Deodato, HM Hunsperger… - PLoS …, 2015 - journals.plos.org
Haptophytes are recognized as seminal players in aquatic ecosystem function. These algae
are important in global carbon sequestration, form destructive harmful blooms, and given …

A single cryptomonad cell harbors a complex community of organelles, bacteria, a phage, and selfish elements

EE George, D Barcytė, G Lax, S Livingston… - Current Biology, 2023 - cell.com
Symbiosis between prokaryotes and microbial eukaryotes (protists) has broadly impacted
both evolution and ecology. Endosymbiosis led to mitochondria and plastids, the latter …

Evolution of the plastid genome in green algae

M Turmel, C Lemieux - Advances in Botanical Research, 2018 - Elsevier
Comparative analyses of green algal plastid genomes (plastomes) have flourished in the
past decade. In addition to improving our understanding of the phylogenetic relationships …

Challenging the importance of plastid genome structure conservation: new insights from euglenophytes

K Maciszewski, A Fells… - Molecular Biology and …, 2022 - academic.oup.com
Plastids, similar to mitochondria, are organelles of endosymbiotic origin, which retained their
vestigial genomes (ptDNA). Their unique architecture, commonly referred to as the …

[HTML][HTML] Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae

HM Hunsperger, T Randhawa, RA Cattolico - BMC Evolutionary Biology, 2015 - Springer
Background Two non-homologous, isofunctional enzymes catalyze the penultimate step of
chlorophyll a synthesis in oxygenic photosynthetic organisms such as cyanobacteria …