DNA methylation pathways and their crosstalk with histone methylation

J Du, LM Johnson, SE Jacobsen… - Nature reviews Molecular …, 2015 - nature.com
Methylation of DNA and of histone 3 at Lys 9 (H3K9) are highly correlated with gene
silencing in eukaryotes from fungi to humans. Both of these epigenetic marks need to be …

Histone methylation in epigenetic regulation and temperature responses

K He, X Cao, X Deng - Current Opinion in Plant Biology, 2021 - Elsevier
Methylation of histones on different lysine residues is dynamically added by distinct writer
enzymes, interpreted by reader proteins, and removed by eraser enzymes. This epigenetic …

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

H Stroud, T Do, J Du, X Zhong, S Feng… - Nature structural & …, 2014 - nature.com
DNA methylation occurs in CG and non-CG sequence contexts. Non-CG methylation is
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …

Arabidopsis REF6 is a histone H3 lysine 27 demethylase

F Lu, X Cui, S Zhang, T Jenuwein, X Cao - Nature genetics, 2011 - nature.com
Polycomb group (PcG)-mediated histone H3 lysine 27 trimethylation (H3K27me3) has a key
role in gene repression and developmental regulation,,,. There is evidence that H3K27me3 …

Epigenetic activation of meiotic recombination near Arabidopsis thaliana centromeres via loss of H3K9me2 and non-CG DNA methylation

CJ Underwood, K Choi, C Lambing, X Zhao… - Genome …, 2018 - genome.cshlp.org
Eukaryotic centromeres contain the kinetochore, which connects chromosomes to the
spindle allowing segregation. During meiosis, centromeres are suppressed for inter …

Histone modifications in transcriptional activation during plant development

A Berr, S Shafiq, WH Shen - Biochimica et Biophysica Acta (BBA)-Gene …, 2011 - Elsevier
In eukaryotic cell nuclei, chromatin states dictated by different combinations of post-
translational modifications of histones, such as acetylation, methylation and …

Plant transgenerational epigenetics

L Quadrana, V Colot - Annual Review of Genetics, 2016 - annualreviews.org
Transgenerational epigenetics is defined in opposition to developmental epigenetics and
implies an absence of resetting of epigenetic states between generations. Unlike mammals …

Chromatin‐remodeling complexes: Conserved and plant‐specific subunits in Arabidopsis

JY Shang, XJ He - Journal of integrative plant biology, 2022 - Wiley Online Library
Adenosine triphosphate‐dependent chromatin remodeling complexes are important for the
regulation of transcription, DNA replication, and genome stability in eukaryotes. Although …

Gene body methylation is conserved between plant orthologs and is of evolutionary consequence

S Takuno, BS Gaut - … of the National Academy of Sciences, 2013 - National Acad Sciences
DNA methylation is a common feature of eukaryotic genomes and is especially common in
noncoding regions of plants. Protein coding regions of plants are often methylated also, but …

[HTML][HTML] Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes

JT Huff, D Zilberman - Cell, 2014 - cell.com
Dnmt1 epigenetically propagates symmetrical CG methylation in many eukaryotes. Their
genomes are typically depleted of CG dinucleotides because of imperfect repair of …