[HTML][HTML] An introduction to biological NMR spectroscopy

D Marion - Molecular & Cellular Proteomics, 2013 - ASBMB
NMR spectroscopy is a powerful tool for biologists interested in the structure, dynamics, and
interactions of biological macromolecules. This review aims at presenting in an accessible …

Practically Useful: What the Rosetta Protein Modeling Suite Can Do for You

KW Kaufmann, GH Lemmon, SL DeLuca… - Biochemistry, 2010 - ACS Publications
The objective of this review is to enable researchers to use the software package Rosetta for
biochemical and biomedicinal studies. We provide a brief review of the six most frequent …

Systematic identification of conditionally folded intrinsically disordered regions by AlphaFold2

TR Alderson, I Pritišanac, Đ Kolarić… - Proceedings of the …, 2023 - National Acad Sciences
The AlphaFold Protein Structure Database contains predicted structures for millions of
proteins. For the majority of human proteins that contain intrinsically disordered regions …

Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks

Y Shen, A Bax - Journal of biomolecular NMR, 2013 - Springer
Abstract A new program, TALOS-N, is introduced for predicting protein backbone torsion
angles from NMR chemical shifts. The program relies far more extensively on the use of …

[HTML][HTML] Structural and functional characterization of two alpha-synuclein strains

L Bousset, L Pieri, G Ruiz-Arlandis, J Gath… - Nature …, 2013 - nature.com
Abstract α-synuclein aggregation is implicated in a variety of diseases including Parkinson's
disease, dementia with Lewy bodies, pure autonomic failure and multiple system atrophy …

[HTML][HTML] Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a

KL Yap, S Li, AM Muñoz-Cabello, S Raguz, L Zeng… - Molecular cell, 2010 - cell.com
Expression of the INK4b/ARF/INK4a tumor suppressor locus in normal and cancerous cell
growth is controlled by methylation of histone H3 at lysine 27 (H3K27me) as directed by the …

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

Y Shen, F Delaglio, G Cornilescu, A Bax - Journal of biomolecular NMR, 2009 - Springer
NMR chemical shifts in proteins depend strongly on local structure. The program TALOS
establishes an empirical relation between 13 C, 15 N and 1 H chemical shifts and backbone …

Structure of the chemokine receptor CXCR1 in phospholipid bilayers

SH Park, BB Das, F Casagrande, Y Tian, HJ Nothnagel… - Nature, 2012 - nature.com
CXCR1 is one of two high-affinity receptors for the CXC chemokine interleukin-8 (IL-8), a
major mediator of immune and inflammatory responses implicated in many disorders …

Molecular structural basis for polymorphism in Alzheimer's β-amyloid fibrils

AK Paravastu, RD Leapman… - Proceedings of the …, 2008 - National Acad Sciences
We describe a full structural model for amyloid fibrils formed by the 40-residue β-amyloid
peptide associated with Alzheimer's disease (Aβ1–40), based on numerous constraints from …

A structural model for Alzheimer's β-amyloid fibrils based on experimental constraints from solid state NMR

AT Petkova, Y Ishii, JJ Balbach… - Proceedings of the …, 2002 - National Acad Sciences
We present a structural model for amyloid fibrils formed by the 40-residue β-amyloid peptide
associated with Alzheimer's disease (Aβ1–40), based on a set of experimental constraints …