Fast-forward genetics enabled by new sequencing technologies

K Schneeberger, D Weigel - Trends in plant science, 2011 - cell.com
New sequencing technologies are dramatically accelerating progress in forward genetics,
and the use of such methods for the rapid identification of mutant alleles will be soon routine …

New technologies for ultra-high throughput genotyping in plants

N Appleby, D Edwards, J Batley - Plant genomics: methods and protocols, 2009 - Springer
Molecular genetic markers represent one of the most powerful tools for the analysis of plant
genomes and the association of heritable traits with underlying genetic variation. Molecular …

A Global Survey of Gene Regulation during Cold Acclimation in Arabidopsis thaliana

MA Hannah, AG Heyer, DK Hincha - PLoS genetics, 2005 - journals.plos.org
Many temperate plant species such as Arabidopsis thaliana are able to increase their
freezing tolerance when exposed to low, nonfreezing temperatures in a process called cold …

Role of FRIGIDA and FLOWERING LOCUS C in Determining Variation in Flowering Time of Arabidopsis

C Shindo, MJ Aranzana, C Lister, C Baxter… - Plant …, 2005 - academic.oup.com
Arabidopsis (Arabidopsis thaliana) accessions provide an excellent resource to dissect the
molecular basis of adaptation. We have selected 192 Arabidopsis accessions collected to …

Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of Arabidopsis plants

VJ Nikiforova, J Kopka, V Tolstikov, O Fiehn… - Plant …, 2005 - academic.oup.com
Sulfur is an essential macroelement in plant and animal nutrition. Plants assimilate inorganic
sulfate into two sulfur-containing amino acids, cysteine and methionine. Low supply of …

Variation of enzyme activities and metabolite levels in 24 Arabidopsis accessions growing in carbon-limited conditions

JM Cross, M von Korff, T Altmann, L Bartzetko… - Plant …, 2006 - academic.oup.com
Our understanding of the interaction of carbon (C) metabolism with nitrogen (N) metabolism
and growth is based mainly on studies of responses to environmental treatments, and …

An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

FA Feltus, J Wan, SR Schulze, JC Estill… - Genome …, 2004 - genome.cshlp.org
Dense coverage of the rice genome with polymorphic DNA markers is an invaluable tool for
DNA marker-assisted breeding, positional cloning, and a wide range of evolutionary studies …

Natural genetic variation in Arabidopsis identifies BREVIS RADIX, a novel regulator of cell proliferation and elongation in the root

CF Mouchel, GC Briggs, CS Hardtke - Genes & development, 2004 - genesdev.cshlp.org
Mutant analysis has been tremendously successful in deciphering the genetics of plant
development. However, less is known about the molecular basis of morphological variation …

Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations

J Lisec, RC Meyer, M Steinfath, H Redestig… - The Plant …, 2008 - Wiley Online Library
Plant growth and development are tightly linked to primary metabolism and are subject to
natural variation. In order to obtain an insight into the genetic factors controlling biomass and …

Heterosis of biomass production in Arabidopsis. Establishment during early development

RC Meyer, O Torjek, M Becher, T Altmann - Plant physiology, 2004 - academic.oup.com
Heterosis has been widely used in agriculture to increase yield and to broaden adaptability
of hybrid varieties and is applied to an increasing number of crop species. We performed a …