Quality control in mass spectrometry‐based proteomics

W Bittremieux, DL Tabb, F Impens… - Mass Spectrometry …, 2018 - Wiley Online Library
Mass spectrometry is a highly complex analytical technique and mass spectrometry‐based
proteomics experiments can be subject to a large variability, which forms an obstacle to …

Strategies to reduce aspecific adsorption of peptides and proteins in liquid chromatography–mass spectrometry based bioanalyses: An overview

K Maes, I Smolders, Y Michotte… - … of Chromatography A, 2014 - Elsevier
In the drug-discovery setting, the development of new peptide and protein-based
biopharmaceuticals attracts increased attention from the pharmaceutical industry and …

Recommendations for the generation, quantification, storage, and handling of peptides used for mass spectrometry–based assays

AN Hoofnagle, JR Whiteaker, SA Carr, E Kuhn… - Clinical …, 2016 - academic.oup.com
BACKGROUND For many years, basic and clinical researchers have taken advantage of the
analytical sensitivity and specificity afforded by mass spectrometry in the measurement of …

Adsorption of cationic peptides to solid surfaces of glass and plastic

K Kristensen, JR Henriksen, TL Andresen - PLoS One, 2015 - journals.plos.org
Cationic membrane-active peptides have been studied for years in the hope of developing
them into novel types of therapeutics. In this article, we investigate an effect that might have …

Suppression of peptide sample losses in autosampler vials

K Stejskal, D Potesil, Z Zdráhal - Journal of proteome research, 2013 - ACS Publications
Protein or peptide sample losses could accompany all steps of the proteomic analysis
workflow. We focused on suppression of sample adsorptive losses during sample storage in …

Spatially-resolved proteomics: rapid quantitative analysis of laser capture microdissected alveolar tissue samples

G Clair, PD Piehowski, T Nicola, JA Kitzmiller… - Scientific reports, 2016 - nature.com
Laser capture microdissection (LCM)-enabled region-specific tissue analyses are critical to
better understand complex multicellular processes. However, current proteomics workflows …

Maximizing hydrophobic peptide recovery in proteomics and antibody development using a mass spectrometry compatible surfactant

S Nie, ROB Johnson, Y Livson, T Greer, X Zheng… - Analytical …, 2022 - Elsevier
Peptide loss due to surface absorption can happen at any step in a protein analysis
workflow and is sometimes especially deleterious for hydrophobic peptides. In this study, we …

Improved sensitivity of the nano ultra-high performance liquid chromatography-tandem mass spectrometric analysis of low-concentrated neuropeptides by reducing …

K Maes, J Van Liefferinge, J Viaene… - … of Chromatography A, 2014 - Elsevier
Obtaining maximal sensitivity of nano UHPLC-MS/MS methods is primordial to quantify
picomolar concentrations of neuropeptides in microdialysis samples. Since aspecific …

Peptide storage: are you getting the best return on your investment? Defining optimal storage conditions for proteomics samples

A Kraut, M Marcellin, A Adrait, L Kuhn… - Journal of proteome …, 2009 - ACS Publications
To comply with current proteomics guidelines, it is often necessary to analyze the same
peptide samples several times. Between analyses, the sample must be stored in such a way …

Step-wise assessment and optimization of sample handling recovery yield for nanoproteomic analysis of 1000 mammalian cells

R Wu, S Xing, M Badv, TF Didar, Y Lu - Analytical chemistry, 2019 - ACS Publications
Protein and peptide adhesion is a major factor contributing to sample loss during proteomic
sample preparation workflows. Sample loss often has detrimental effects on the quality of …