The current status on the taxonomy of Pseudomonas revisited: an update

A Peix, MH Ramírez-Bahena, E Velázquez - Infection, Genetics and …, 2018 - Elsevier
The genus Pseudomonas described in 1894 is one of the most diverse and ubiquitous
bacterial genera which encompass species isolated worldwide. In the last years more than …

Prokaryotic taxonomy in the sequencing era–the polyphasic approach revisited

P Kämpfer, SP Glaeser - Environmental microbiology, 2012 - Wiley Online Library
The ultimate goal of taxonomy is to establish a system that mirrors the 'order in nature'. In
prokaryote microbiology, almost all taxonomic concepts try to mirror the whole evolutionary …

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

JE Loper, KA Hassan, DV Mavrodi, EW Davis… - PLoS …, 2012 - journals.plos.org
We provide here a comparative genome analysis of ten strains within the Pseudomonas
fluorescens group including seven new genomic sequences. These strains exhibit a diverse …

Grinder: a versatile amplicon and shotgun sequence simulator

FE Angly, D Willner, F Rohwer… - Nucleic acids …, 2012 - academic.oup.com
Abstract We introduce Grinder (http://sourceforge. net/projects/biogrinder/), an open-source
bioinformatic tool to simulate amplicon and shotgun (genomic, metagenomic, transcriptomic …

Bacteria with phosphate solubilizing capacity alter mycorrhizal fungal growth both inside and outside the root and in the presence of native microbial communities

YM Ordoñez, BR Fernandez, LS Lara, A Rodriguez… - PloS one, 2016 - journals.plos.org
Arbuscular mycorrhizal fungi (AMF) and phosphate solubilizing Pseudomonas bacteria
(PSB) could potentially interact synergistically because PSB solubilize phosphate into a form …

Diversity and antibiotic resistance in Pseudomonas spp. from drinking water

I Vaz-Moreira, OC Nunes, CM Manaia - Science of the Total Environment, 2012 - Elsevier
Pseudomonas spp. are common inhabitants of aquatic environments, including drinking
water. Multi-antibiotic resistance in clinical isolates of P. aeruginosa is widely reported and …

Trends in Molecular Diagnosis and Diversity Studies for Phytosanitary Regulated Xanthomonas

V Catara, J Cubero, JF Pothier, E Bosis, C Bragard… - Microorganisms, 2021 - mdpi.com
Bacteria in the genus Xanthomonas infect a wide range of crops and wild plants, with most
species responsible for plant diseases that have a global economic and environmental …

Comparative analysis of the core proteomes among the Pseudomonas major evolutionary groups reveals species-specific adaptations for Pseudomonas aeruginosa …

M Nikolaidis, D Mossialos, SG Oliver, GD Amoutzias - Diversity, 2020 - mdpi.com
The Pseudomonas genus includes many species living in diverse environments and hosts. It
is important to understand which are the major evolutionary groups and what are the …

Visceral granulomas in farmed large yellow croaker, Larimichthys crocea (Richardson), caused by a bacterial pathogen, Pseudomonas plecoglossicida

JT Zhang, SM Zhou, SW An, L Chen… - Journal of fish …, 2014 - Wiley Online Library
An enzootic disease characterized by granulomas in internal organs occurred in cage‐
farmed large yellow croaker, L arimichthys crocea (R ichardson), in A pril and N ovember …

Concordance between whole-cell matrix-assisted laser-desorption/ionization time-of-flight mass spectrometry and multilocus sequence analysis approaches in …

M Mulet, M Gomila, C Scotta, D Sánchez… - Systematic and applied …, 2012 - Elsevier
Multilocus sequence analysis (MLSA) is one of the most accepted methods for the
phylogenetic assignation of Pseudomonas strains to their corresponding species …