Can systems biology advance clinical precision oncology?

A Rocca, BN Kholodenko - Cancers, 2021 - mdpi.com
Simple Summary Omics technologies and targeted drugs are revolutionizing the clinical
oncology landscape, portending the promise of precision oncology. However, our abilities to …

Dynamic regulation of RAS and RAS signaling

W Kolch, D Berta, E Rosta - Biochemical Journal, 2023 - portlandpress.com
RAS proteins regulate most aspects of cellular physiology. They are mutated in 30% of
human cancers and 4% of developmental disorders termed Rasopathies. They cycle …

Adagrasib, a KRAS G12C inhibitor, reverses the multidrug resistance mediated by ABCB1 in vitro and in vivo

Y Zhang, C Li, C Xia, KK Wah To, Z Guo, C Ren… - Cell Communication and …, 2022 - Springer
Background Multidrug resistance (MDR) is a complex phenomenon that frequently leads to
chemotherapy failure during cancer treatment. The overexpression of ATP-binding cassette …

Optogenetic actuator–ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics

C Dessauges, J Mikelson, M Dobrzyński… - Molecular systems …, 2022 - embopress.org
Combining single‐cell measurements of ERK activity dynamics with perturbations provides
insights into the MAPK network topology. We built circuits consisting of an optogenetic …

[HTML][HTML] Uncovering the pharmacological mechanisms of Xijiao Dihuang decoction combined with Yinqiao powder in treating influenza viral pneumonia by an …

R Guo, M Zhao, H Liu, R Su, Q Mao, L Gong… - Biomedicine & …, 2021 - Elsevier
Xijiao Dihuang decoction combined with Yinqiao powder (XDD-YQP) is a classical
combination formula; however, its therapeutic effects in treating influenza viral pneumonia …

Biomarker value of mir-221 and mir-222 as potential substrates in the differential diagnosis of papillary thyroid cancer based on data synthesis and bioinformatics …

S Cai, J Ma, Y Wang, Y Cai, L Xie, X Chen… - Frontiers in …, 2022 - frontiersin.org
Background MicroRNA (miRNA) has been reported to play a critical regulatory role in
papillary thyroid carcinomas (PTC). However, the role of miR-221/222 in PTC remains …

KRAS Inhibitor that simultaneously inhibits nucleotide exchange activity and effector engagement

CV Pagba, AK Gupta, AK Naji… - ACS bio & med …, 2022 - ACS Publications
We describe a small molecule ligand ACA-14 (2-hydroxy-5-{[(2-phenylcyclopropyl) carbonyl]
amino} benzoic acid) as an initial lead for the development of direct inhibitors of KRAS, a …

[HTML][HTML] Identification of microRNA-92a and the related combination biomarkers as promising substrates in predicting risk, recurrence and poor survival of colorectal …

Q Peng, Y Shen, K Lin, L Zou, Y Shen, Y Zhu - Journal of Cancer, 2019 - ncbi.nlm.nih.gov
Background: Previous studies demonstrated that microRNA-92a (miR-92a) may serve as a
novel promising biomarker in colorectal cancer (CRC) patients. However, a comprehensive …

Signaling alterations caused by drugs and autophagy

P Dent, L Booth, A Poklepovic, JF Hancock - Cellular Signalling, 2019 - Elsevier
Autophagy is an evolutionary conserved process that recycles cellular materials in times of
nutrient restriction to maintain viability. In cancer therapeutics, the role of autophagy in …

Regulation of the small GTPase Ras and its relevance to human disease

KR Kulhanek, JP Roose, I Rubio - Ras Activity and Signaling: Methods and …, 2021 - Springer
Ras research has experienced a considerable boost in recent years, not least prompted by
the Ras initiative launched by the NCI in 2013 (https://www. cancer. gov/research/key …