What is the “modified” CTAB protocol? Characterizing modifications to the CTAB DNA extraction protocol

JJ Schenk, LE Becklund, SJ Carey… - Applications in Plant …, 2023 - Wiley Online Library
Cetyltrimethylammonium bromide (CTAB)–based methods are widely used to isolate DNA
from plant tissues, but the unique chemical composition of secondary metabolites among …

Strategies for reducing per‐sample costs in target capture sequencing for phylogenomics and population genomics in plants

H Hale, EM Gardner, J Viruel, L Pokorny… - Applications in plant …, 2020 - Wiley Online Library
The reduced cost of high‐throughput sequencing and the development of gene sets with
wide phylogenetic applicability has led to the rise of sequence capture methods as a …

A comprehensive phylogenomic platform for exploring the angiosperm tree of life

WJ Baker, P Bailey, V Barber, A Barker… - Systematic …, 2022 - academic.oup.com
The tree of life is the fundamental biological roadmap for navigating the evolution and
properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering …

A new classification of Cyperaceae (Poales) supported by phylogenomic data

I Larridon, AR Zuntini, É Léveillé‐Bourret… - … of Systematics and …, 2021 - Wiley Online Library
Cyperaceae (sedges) are the third largest monocot family and are of considerable economic
and ecological importance. Sedges represent an ideal model family to study evolutionary …

[HTML][HTML] Phylogenomics of Gesneriaceae using targeted capture of nuclear genes

E Ogutcen, C Christe, K Nishii, N Salamin… - Molecular Phylogenetics …, 2021 - Elsevier
Abstract Gesneriaceae (ca. 3400 species) is a pantropical plant family with a wide range of
growth form and floral morphology that are associated with repeated adaptations to different …

A new classification of Carex (Cyperaceae) subgenera supported by a HybSeq backbone phylogenetic tree

T Villaverde, P Jimenez-Mejias… - Botanical Journal of …, 2020 - academic.oup.com
The field of systematics is experiencing a new molecular revolution driven by the increased
availability of high-throughput sequencing technologies. As these techniques become more …

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

WJ Baker, S Dodsworth, F Forest, SW Graham… - 2021 - ttu-ir.tdl.org
The unveiling of the angiosperm (flowering plant) tree of life over the past three decades has
been one of the great success stories of modern plant biology. Flowering plants underpin …

A target enrichment probe set for resolving the flagellate land plant tree of life

JW Breinholt, SB Carey, GP Tiley… - Applications in plant …, 2021 - Wiley Online Library
PREMISE New sequencing technologies facilitate the generation of large‐scale molecular
data sets for constructing the plant tree of life. We describe a new probe set for target …

Cyperus spp.: A Review on Phytochemical Composition, Biological Activity, and Health‐Promoting Effects

Y Taheri, J Herrera-Bravo, L Huala… - Oxidative Medicine …, 2021 - Wiley Online Library
Cyperaceae are a plant family of grass‐like monocots, comprising 5600 species with a
cosmopolitan distribution in temperate and tropical regions. Phytochemically, Cyperus is …

Plant phylogeography of the Balkan Peninsula: spatiotemporal patterns and processes

S Španiel, I Rešetnik - Plant Systematics and Evolution, 2022 - Springer
Abstract The Balkan Peninsula is widely acknowledged as one of the centers of European
biodiversity and a major glacial refugium for plant species. Its extensive geographic …