Effects of antibiotic resistance genes and antibiotics on the transport and deposition behaviors of bacteria in porous media

S Wang, L He, M Zhang, X Su, F Liu… - Environmental …, 2023 - ACS Publications
Antibiotics present in the natural environment would induce the generation of antibiotic-
resistant bacteria (ARB), causing great environmental risks. The effects of antibiotic …

Modeling metabolic networks of individual bacterial agents in heterogeneous and dynamic soil habitats (IndiMeSH)

B Borer, M Ataman, V Hatzimanikatis… - PLoS computational …, 2019 - journals.plos.org
Natural soil is characterized as a complex habitat with patchy hydrated islands and spatially
variable nutrients that is in a constant state of change due to wetting-drying dynamics. Soil …

Multiflagellarity leads to the size-independent swimming speed of peritrichous bacteria

S Kamdar, D Ghosh, W Lee… - Proceedings of the …, 2023 - National Acad Sciences
To swim through a viscous fluid, a flagellated bacterium must overcome the fluid drag on its
body by rotating a flagellum or a bundle of multiple flagella. Because the drag increases with …

A Schrödinger equation for evolutionary dynamics

VD Ao, DV Tran, KT Pham, DM Nguyen, HD Tran… - Quantum …, 2023 - mdpi.com
We establish an analogy between the Fokker–Planck equation describing evolutionary
landscape dynamics and the Schrödinger equation which characterizes quantum …

Escaping speed of bacteria from confinement

Y Yin, HT Yu, H Tan, H Cai, HY Chen, CJ Lo, S Guo - Biophysical Journal, 2022 - cell.com
Microswimmers such as bacteria exhibit large speed fluctuation when exploring their living
environment. Here, we show that the bacterium Escherichia coli with a wide range of length …

Stress-Induced Mutagenesis Can Further Boost Population Success in Static Ecology

KT Pham, DM Nguyen, DV Tran, VD Ao… - arXiv preprint arXiv …, 2023 - arxiv.org
We have developed a mathematical model that captures stress-induced mutagenesis, a
fundamental aspect of pathogenic and neoplastic evolutionary dynamics, on the fitness …

[HTML][HTML] Microfluidic Ecology Unravels the Genetic and Ecological Drivers of T4r Bacteriophage Resistance in E. coli: Insights into Biofilm-Mediated Evolution

K Nagy, SK Valappil, TV Phan, S Li, L Dér… - Research …, 2024 - pmc.ncbi.nlm.nih.gov
We use a microfluidic ecology which generates non-uniform phage concentration gradients
and micro-ecological niches to reveal the importance of time, spatial population structure …

Buckling under stress

A York - Nature Reviews Microbiology, 2019 - nature.com
A rainbow of influenza virions Page 1 Methicillin-resistant Staphylococcus aureus (MRSA)
is a leading cause of life-threatening infections associated with the failure of antibiotic …