Carbohydrate binding modules: diversity of domain architecture in amylases and cellulases from filamentous microorganisms
A Sidar, ED Albuquerque, GP Voshol… - … in Bioengineering and …, 2020 - frontiersin.org
Enzymatic degradation of abundant renewable polysaccharides such as cellulose and
starch is a field that has the attention of both the industrial and scientific community. Most of …
starch is a field that has the attention of both the industrial and scientific community. Most of …
A systematic analysis of marine lysogens and proviruses
Y Yi, S Liu, Y Hao, Q Sun, X Lei, Y Wang… - Nature …, 2023 - nature.com
Viruses are ubiquitous in the oceans, exhibiting high abundance and diversity. Here, we
systematically analyze existing genomic sequences of marine prokaryotes to compile a …
systematically analyze existing genomic sequences of marine prokaryotes to compile a …
SAXSMoW 2.0: Online calculator of the molecular weight of proteins in dilute solution from experimental SAXS data measured on a relative scale
V Piiadov, E Ares de Araújo, M Oliveira Neto… - Protein …, 2019 - Wiley Online Library
Abstract Knowledge of molecular weight, oligomeric states, and quaternary arrangements of
proteins in solution is fundamental for understanding their molecular functions and activities …
proteins in solution is fundamental for understanding their molecular functions and activities …
Analysis of carbohydrates and glycoconjugates by matrix‐assisted laser desorption/ionization mass spectrometry: an update for 2015–2016
DJ Harvey - Mass Spectrometry Reviews, 2021 - Wiley Online Library
This review is the ninth update of the original article published in 1999 on the application of
matrix‐assisted laser desorption/ionization (MALDI) mass spectrometry to the analysis of …
matrix‐assisted laser desorption/ionization (MALDI) mass spectrometry to the analysis of …
Thermophiles and carbohydrate-active enzymes (CAZymes) in biofilm microbial consortia that decompose lignocellulosic plant litters at high temperatures
The SKY hot spring is a unique site filled with a thick layer of plant litter. With the
advancement of next-generation sequencing, it is now possible to mine many new …
advancement of next-generation sequencing, it is now possible to mine many new …
Feasibility insights into the application of Paenibacillus pabuli E1 in animal feed to eliminate non-starch polysaccharides
G Li, Y Yuan, B Jin, Z Zhang, B Murtaza… - Frontiers in …, 2023 - frontiersin.org
The goal of the research was to find alternative protein sources for animal farming that are
efficient and cost-effective. The researchers focused on distillers dried grains with solubles …
efficient and cost-effective. The researchers focused on distillers dried grains with solubles …
[HTML][HTML] Fungal cellulases: Protein engineering and post-translational modifications
R Zhang, C Cao, J Bi, Y Li - Applied Microbiology and Biotechnology, 2022 - Springer
Enzymatic degradation of lignocelluloses into fermentable sugars to produce biofuels and
other biomaterials is critical for environmentally sustainable development and energy …
other biomaterials is critical for environmentally sustainable development and energy …
Molecular dynamics simulations elucidate conformational selection and induced fit mechanisms in the binding of PD-1 and PD-L1
Blockage of the interactions between immunologic checkpoint protein PD-1 and its ligand
PD-L1 showed efficacy for cancer treatment. X-ray structures have captured static …
PD-L1 showed efficacy for cancer treatment. X-ray structures have captured static …
A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis
EM Glasgow, EI Kemna, CA Bingman, N Ing… - Journal of Biological …, 2020 - ASBMB
Broad-specificity glycoside hydrolases (GHs) contribute to plant biomass hydrolysis by
degrading a diverse range of polysaccharides, making them useful catalysts for renewable …
degrading a diverse range of polysaccharides, making them useful catalysts for renewable …
Dataset from a human-in-the-loop approach to identify functionally important protein residues from literature
We present a novel system that leverages curators in the loop to develop a dataset and
model for detecting structure features and functional annotations at residue-level from …
model for detecting structure features and functional annotations at residue-level from …