Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
The integrated genomics of crop domestication and breeding
X Huang, S Huang, B Han, J Li - Cell, 2022 - cell.com
As a major event in human civilization, wild plants were successfully domesticated to be
crops, largely owing to continuing artificial selection. Here, we summarize new discoveries …
crops, largely owing to continuing artificial selection. Here, we summarize new discoveries …
Genome evolution and diversity of wild and cultivated potatoes
Potato (Solanum tuberosum L.) is the world's most important non-cereal food crop, and the
vast majority of commercially grown cultivars are highly heterozygous tetraploids. Advances …
vast majority of commercially grown cultivars are highly heterozygous tetraploids. Advances …
Solanum americanum genome-assisted discovery of immune receptors that detect potato late blight pathogen effectors
Potato (Solanum tuberosum) and tomato (Solanum lycopersicon) crops suffer severe losses
to late blight caused by the oomycete pathogen Phytophthora infestans. Solanum …
to late blight caused by the oomycete pathogen Phytophthora infestans. Solanum …
Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning …
Cultivated potato is a clonally propagated autotetraploid species with a highly
heterogeneous genome. Phased assemblies of six cultivars including two chromosome …
heterogeneous genome. Phased assemblies of six cultivars including two chromosome …
Genome design of hybrid potato
C Zhang, Z Yang, D Tang, Y Zhu, P Wang, D Li, G Zhu… - Cell, 2021 - cell.com
Reinventing potato from a clonally propagated tetraploid into a seed-propagated diploid,
hybrid potato, is an important innovation in agriculture. Due to deleterious mutations, it has …
hybrid potato, is an important innovation in agriculture. Due to deleterious mutations, it has …
Chromosome-scale and haplotype-resolved genome assembly of a tetraploid potato cultivar
Potato is the most widely produced tuber crop worldwide. However, reconstructing the four
haplotypes of its autotetraploid genome remained an unsolved challenge. Here, we report …
haplotypes of its autotetraploid genome remained an unsolved challenge. Here, we report …
Enhancing crop diversity for food security in the face of climate uncertainty
Global agriculture is dominated by a handful of species that currently supply a huge
proportion of our food and feed. It additionally faces the massive challenge of providing food …
proportion of our food and feed. It additionally faces the massive challenge of providing food …
Plant pan-genomics and its applications
J Shi, Z Tian, J Lai, X Huang - Molecular Plant, 2023 - cell.com
Plant genomes are so highly diverse that a substantial proportion of genomic sequences are
not shared among individuals. The variable DNA sequences, along with the conserved core …
not shared among individuals. The variable DNA sequences, along with the conserved core …
Allele-aware chromosome-level genome assembly of Artemisia annua reveals the correlation between ADS expansion and artemisinin yield
B Liao, X Shen, L Xiang, S Guo, S Chen, Y Meng… - Molecular plant, 2022 - cell.com
Artemisia annua is the major natural source of artemisinin, an anti-malarial medicine
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …