[HTML][HTML] Threespine stickleback: A model system for evolutionary genomics

K Reid, MA Bell, KR Veeramah - Annual review of genomics …, 2021 - annualreviews.org
The repeated adaptation of oceanic threespine sticklebacks to fresh water has made it a
premier organism to study parallel evolution. These small fish have multiple distinct …

Inversions and parallel evolution

AM Westram, R Faria… - … of the Royal …, 2022 - royalsocietypublishing.org
Local adaptation leads to differences between populations within a species. In many
systems, similar environmental contrasts occur repeatedly, sometimes driving parallel …

Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution

GA Roberts Kingman, DN Vyas, FC Jones… - Science …, 2021 - science.org
Similar forms often evolve repeatedly in nature, raising long-standing questions about the
underlying mechanisms. Here, we use repeated evolution in stickleback to identify a large …

[HTML][HTML] Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia

A Chaturvedi, J Zhou, JAM Raeymaekers… - Nature …, 2021 - nature.com
We lack a thorough understanding of the origin and maintenance of standing genetic
variation that enables rapid evolutionary responses of natural populations. Whole genome …

Population structure limits parallel evolution in sticklebacks

B Fang, P Kemppainen, P Momigliano… - Molecular Biology and …, 2021 - academic.oup.com
Population genetic theory predicts that small effective population sizes (N e) and restricted
gene flow limit the potential for local adaptation. In particular, the probability of evolving …

Efficiently summarizing relationships in large samples: a general duality between statistics of genealogies and genomes

P Ralph, K Thornton, J Kelleher - Genetics, 2020 - academic.oup.com
As a genetic mutation is passed down across generations, it distinguishes those genomes
that have inherited it from those that have not, providing a glimpse of the genealogical tree …

[HTML][HTML] Ancient and modern stickleback genomes reveal the demographic constraints on adaptation

M Kirch, A Romundset, MTP Gilbert, FC Jones… - Current Biology, 2021 - cell.com
Adaptation is typically studied by comparing modern populations with contrasting
environments. Individuals persisting in the ancestral habitat are typically used to represent …

Selection on standing genetic variation mediates convergent evolution in extremophile fish

K Ryan, R Greenway, J Landers… - Molecular …, 2023 - Wiley Online Library
Hydrogen sulfide is a toxic gas that disrupts numerous biological processes, including
energy production in the mitochondria, yet fish in the Poecilia mexicana species complex …

Genomic erosion in the assessment of species extinction risk and recovery potential

C van Oosterhout, SA Speak, T Birley, C Bortoluzzi… - BioRxiv, 2022 - biorxiv.org
Many species are facing unprecedented population size declines and deterioration of their
environment. This exposes species to genomic erosion, which we define here as the …

[HTML][HTML] Moving beyond the adaptationist paradigm for human evolution, and why it matters

L Schroeder, RR Ackermann - Journal of Human Evolution, 2023 - Elsevier
Abstract The Journal of Human Evolution (JHE) was founded 50 years ago when much of
the foundation for how we think about human evolution was in place or being put in place …