Histone post-translational modifications—cause and consequence of genome function
G Millán-Zambrano, A Burton, AJ Bannister… - Nature Reviews …, 2022 - nature.com
Much has been learned since the early 1960s about histone post-translational modifications
(PTMs) and how they affect DNA-templated processes at the molecular level. This …
(PTMs) and how they affect DNA-templated processes at the molecular level. This …
The maternal-to-zygotic transition revisited
NL Vastenhouw, WX Cao, HD Lipshitz - Development, 2019 - journals.biologists.com
The development of animal embryos is initially directed by maternal gene products. Then,
during the maternal-to-zygotic transition (MZT), developmental control is handed to the …
during the maternal-to-zygotic transition (MZT), developmental control is handed to the …
RNA 5-methylcytosine facilitates the maternal-to-zygotic transition by preventing maternal mRNA decay
Y Yang, L Wang, X Han, WL Yang, M Zhang, HL Ma… - Molecular cell, 2019 - cell.com
The maternal-to-zygotic transition (MZT) is a conserved and fundamental process during
which the maternal environment is converted to an environment of embryonic-driven …
which the maternal environment is converted to an environment of embryonic-driven …
Transcription organizes euchromatin via microphase separation
L Hilbert, Y Sato, K Kuznetsova, T Bianucci… - Nature …, 2021 - nature.com
In eukaryotes, DNA is packed inside the cell nucleus in the form of chromatin, which consists
of DNA, proteins such as histones, and RNA. Euchromatin, which is permissive for …
of DNA, proteins such as histones, and RNA. Euchromatin, which is permissive for …
Transposable elements drive the evolution of metazoan zinc finger genes
JN Wells, NC Chang, J McCormick… - Genome …, 2023 - genome.cshlp.org
Cys2-His2 zinc finger genes (ZNFs) form the largest family of transcription factors in
metazoans. ZNF evolution is highly dynamic and characterized by the rapid expansion and …
metazoans. ZNF evolution is highly dynamic and characterized by the rapid expansion and …
Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis
Y Sato, L Hilbert, H Oda, Y Wan… - …, 2019 - journals.biologists.com
Histone post-translational modifications are key gene expression regulators, but their rapid
dynamics during development remain difficult to capture. We applied a Fab-based live …
dynamics during development remain difficult to capture. We applied a Fab-based live …
Chromatin regulates expression of small RNAs to help maintain transposon methylome homeostasis in Arabidopsis
RK Papareddy, K Páldi, S Paulraj, P Kao, S Lutzmayer… - Genome Biology, 2020 - Springer
Background Eukaryotic genomes are partitioned into euchromatic and heterochromatic
domains to regulate gene expression and other fundamental cellular processes. However …
domains to regulate gene expression and other fundamental cellular processes. However …
Single-cell profiling of transcriptome and histone modifications with EpiDamID
FJ Rang, KL de Luca, SS de Vries, C Valdes-Quezada… - Molecular Cell, 2022 - cell.com
Recent advances in single-cell sequencing technologies have enabled simultaneous
measurement of multiple cellular modalities, but the combined detection of histone post …
measurement of multiple cellular modalities, but the combined detection of histone post …
miR-430 regulates zygotic mRNA during zebrafish embryogenesis
D Baia Amaral, R Egidy, A Perera, AA Bazzini - Genome Biology, 2024 - Springer
Background Early embryonic developmental programs are guided by the coordinated
interplay between maternally inherited and zygotically manufactured RNAs and proteins …
interplay between maternally inherited and zygotically manufactured RNAs and proteins …
Crosstalk between codon optimality and cis-regulatory elements dictates mRNA stability
SG Medina-Muñoz, G Kushawah, LA Castellano… - Genome biology, 2021 - Springer
Background The regulation of messenger RNA (mRNA) stability has a profound impact on
gene expression dynamics during embryogenesis. For example, in animals, maternally …
gene expression dynamics during embryogenesis. For example, in animals, maternally …