Whole-genome sequencing of bacterial pathogens: the future of nosocomial outbreak analysis

S Quainoo, JPM Coolen, SAFT van Hijum… - Clinical microbiology …, 2017 - Am Soc Microbiol
Outbreaks of multidrug-resistant bacteria present a frequent threat to vulnerable patient
populations in hospitals around the world. Intensive care unit (ICU) patients are particularly …

Genomic insights into Brucella

J Rajendhran - Infection, Genetics and Evolution, 2021 - Elsevier
Brucellosis is a zoonotic disease caused by certain species of Brucella. Each species has its
preferred host animal, though it can infect other animals too. For a longer period, only six …

Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) genotyping of Escherichia coli strains isolated from different animal stool …

R Ranjbar, A Tabatabaee, P Behzadi… - Iranian journal of …, 2016 - pmc.ncbi.nlm.nih.gov
Background: Escherichia coli is a commensal-pathogenic organism, which includes a wide
range of strains. Despite several advanced molecular-genomic technologies for detecting …

Identification of Cross‐Protective Potential Antigens against Pathogenic Brucella spp. through Combining Pan‐Genome Analysis with Reverse Vaccinology

Y Hisham, Y Ashhab - Journal of Immunology Research, 2018 - Wiley Online Library
Brucellosis is a zoonotic infectious disease caused by bacteria of the genus Brucella.
Brucella melitensis, Brucella abortus, and Brucella suis are the most pathogenic species of …

[HTML][HTML] Microarray long oligo probe designing for Escherichia coli: an in-silico DNA marker extraction

P Behzadi, A Najafi, E Behzadi… - Central European journal …, 2016 - ncbi.nlm.nih.gov
Results In this study, 15 long oligo microarray probes were designed for detecting and
identifying different strains of E. coli such as UPEC. These probes possessed the best …

[HTML][HTML] Pan-genomics of Ochrobactrum species from clinical and environmental origins reveals distinct populations and possible links

K Gohil, V Rajput, M Dharne - Genomics, 2020 - Elsevier
Ochrobactrum genus is comprised of soil-dwelling Gram-negative bacteria mainly reported
for bioremediation of toxic compounds. Since last few years, mainly two species of this …

[PDF][PDF] Brucella spp. virulence factors

TH HASAN, HALI KADHUM… - International Journal of …, 2021 - researchgate.net
Brucella is one of the pathogens that spread globally, these bacteria are transmitted by
livestock and their products, and their infections are chronic infections due to the presence of …

Identification of genetic variants of Brucella spp. through genome-wide association studies

J Sankarasubramanian, US Vishnu… - Infection, Genetics and …, 2017 - Elsevier
Brucellosis is an important zoonotic disease caused by Brucella spp. We present a
phylogeny of 552 strains based on genome-wide single nucleotide polymorphisms (SNPs) …

[HTML][HTML] Respiratory tularemia: Francisella tularensis and microarray probe designing

R Ranjbar, P Behzadi, C Mammina - The open microbiology …, 2016 - ncbi.nlm.nih.gov
Background: Francisella tularensis (F. tularensis) is the etiological microorganism for
tularemia. There are different forms of tularemia such as respiratory tularemia. Respiratory …

Comparative genomics of Brucella abortus and Brucella melitensis unravels the gene sharing, virulence factors and SNP diversity among the standard, vaccine and …

S Anbazhagan, KM Himani, R Karthikeyan… - International …, 2024 - Springer
Brucella abortus and Brucella melitensis are the primary etiological agents of brucellosis in
large and small ruminants, respectively. There are limited comparative genomic studies …