Multi-atlas segmentation of biomedical images: a survey
JE Iglesias, MR Sabuncu - Medical image analysis, 2015 - Elsevier
Abstract Multi-atlas segmentation (MAS), first introduced and popularized by the pioneering
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …
[HTML][HTML] Network analysis of neuroimaging in mice
Graph theory allows assessing changes of neuronal connectivity and interactions of brain
regions in response to local lesions, eg, after stroke, and global perturbations, eg, due to …
regions in response to local lesions, eg, after stroke, and global perturbations, eg, due to …
Microbiota influence the development of the brain and behaviors in C57BL/6J mice
We investigated the contributions of commensal bacteria to brain structural maturation by
magnetic resonance imaging and behavioral tests in four and 12 weeks old C57BL/6J …
magnetic resonance imaging and behavioral tests in four and 12 weeks old C57BL/6J …
Mapping of CSF transport using high spatiotemporal resolution dynamic contrast‐enhanced MRI in mice: effect of anesthesia
EH Stanton, NDÅ Persson, RS Gomolka… - Magnetic …, 2021 - Wiley Online Library
Purpose Dynamic contrast‐enhanced MRI (DCE‐MRI) represents the only available
approach for glymphatic cerebrospinal fluid (CSF) flow 3D mapping in the brain of living …
approach for glymphatic cerebrospinal fluid (CSF) flow 3D mapping in the brain of living …
[HTML][HTML] aMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data
CJ Niedworok, APY Brown, M Jorge Cardoso… - Nature …, 2016 - nature.com
The validation of automated image registration and segmentation is crucial for accurate and
reliable mapping of brain connectivity and function in three-dimensional (3D) data sets …
reliable mapping of brain connectivity and function in three-dimensional (3D) data sets …
Volume measurements of individual muscles in human quadriceps femoris using atlas-based segmentation approaches
A Le Troter, A Fouré, M Guye, S Confort-Gouny… - … Resonance Materials in …, 2016 - Springer
Objectives Atlas-based segmentation is a powerful method for automatic structural
segmentation of several sub-structures in many organs. However, such an approach has …
segmentation of several sub-structures in many organs. However, such an approach has …
Bone marrow drives central nervous system regeneration after radiation injury
J Dietrich, N Baryawno, N Nayyar… - The Journal of …, 2018 - Am Soc Clin Investig
Nervous system injury is a frequent result of cancer therapy involving cranial irradiation,
leaving patients with marked memory and other neurobehavioral disabilities. Here, we …
leaving patients with marked memory and other neurobehavioral disabilities. Here, we …
Validation of clinical acceptability of an atlas‐based segmentation algorithm for the delineation of organs at risk in head and neck cancer
AK Hoang Duc, G Eminowicz, R Mendes… - Medical …, 2015 - Wiley Online Library
Purpose: The aim of this study was to assess whether clinically acceptable segmentations of
organs at risk (OARs) in head and neck cancer can be obtained automatically and efficiently …
organs at risk (OARs) in head and neck cancer can be obtained automatically and efficiently …
AAV5-miHTT-mediated huntingtin lowering improves brain health in a Huntington's disease mouse model
SB Thomson, A Stam, C Brouwers, V Fodale… - Brain, 2023 - academic.oup.com
Huntingtin (HTT)-lowering therapies show great promise in treating Huntington's disease.
We have developed a microRNA targeting human HTT that is delivered in an adeno …
We have developed a microRNA targeting human HTT that is delivered in an adeno …
Accelerating multipool CEST MRI of Parkinson's disease using deep learning–based Z‐spectral compressed sensing
Purpose To develop a deep learning–based approach to reduce the scan time of multipool
CEST MRI for Parkinson's disease (PD) while maintaining sufficient prediction accuracy …
CEST MRI for Parkinson's disease (PD) while maintaining sufficient prediction accuracy …