[HTML][HTML] Investigating reproducibility and tracking provenance–a genomic workflow case study

S Kanwal, FZ Khan, A Lonie, RO Sinnott - BMC bioinformatics, 2017 - Springer
Background Computational bioinformatics workflows are extensively used to analyse
genomics data, with different approaches available to support implementation and execution …

[PDF][PDF] NiW: Converting Notebooks into Workflows to Capture Dataflow and Provenance.

LAMC Carvalho, R Wang, Y Gil, D Garijo - K-CAP Workshops, 2017 - dgarijo.com
Interactive notebooks are increasingly popular among scientists to expose computational
methods and share their results. However, it is often challenging to track their dataflow, and …

Computer-assisted scientific workflow design

N Cerezo, J Montagnat, M Blay-Fornarino - Journal of grid computing, 2013 - Springer
Workflows are increasingly adopted to describe large-scale data-and compute-intensive
processes that can take advantage of today's Distributed Computing Infrastructures. Still …

Teaching parallelism without programming: a data science curriculum for non-CS students

Y Gil - 2014 Workshop on Education for High Performance …, 2014 - ieeexplore.ieee.org
The goal of our work is to develop an open and modular course for data science and big
data analytics that is accessible to non-programmers. The course is designed to cover major …

Teaching big data analytics skills with intelligent workflow systems

Y Gil - Proceedings of the AAAI conference on artificial …, 2016 - ojs.aaai.org
We have designed an open and modular course for data science and big data analytics
using a workflow paradigm that allows students to easily experience big data through a …

Large-scale multimedia content analysis using scientific workflows

RJ Sethi, Y Gil, H Jo, A Philpot - Proceedings of the 21st ACM …, 2013 - dl.acm.org
Analyzing web content, particularly multimedia content, for security applications is of great
interest. However, it often requires deep expertise in data analytics that is not always …

Scientific workflows in data analysis: Bridging expertise across multiple domains

RJ Sethi, Y Gil - Future Generation Computer Systems, 2017 - Elsevier
In this paper, we demonstrate the use of scientific workflows in bridging expertise across
multiple domains by re-purposing workflow fragments in the areas of text analysis, image …

Advanced data analytics education for students and companies

M Marttila-Kontio, M Kontio, V Hotti - Proceedings of the 2014 …, 2014 - dl.acm.org
In this paper we introduce a regional education project and a positive experience of quick
implementation of a new training package enabled by public funding from the European …

OWL-DL domain-models as abstract workflows

I Wood, B Vandervalk, L McCarthy… - Leveraging Applications of …, 2012 - Springer
Workflows are an increasingly common way of representing and sharing complex in silico
analytical methodologies. Workflow authoring systems such as Taverna and Galaxy …

[PDF][PDF] Query Model and Similarity-Based Retrieval for Workflow Reuse in the Digital Humanities.

L Malburg, N Münster, C Zeyen, R Bergmann - LWDA, 2018 - ceur-ws.org
Scientific Workflows do not seem to be broadly used today in the Digital Humanities to
perform text and data analysis. Although they have become established in e-Science …