Fluorescence nanoscopy in cell biology

SJ Sahl, SW Hell, S Jakobs - Nature reviews Molecular cell biology, 2017 - nature.com
Fluorescence nanoscopy uniquely combines minimally invasive optical access to the
internal nanoscale structure and dynamics of cells and tissues with molecular detection …

A review of super-resolution single-molecule localization microscopy cluster analysis and quantification methods

IM Khater, IR Nabi, G Hamarneh - Patterns, 2020 - cell.com
Single-molecule localization microscopy (SMLM) is a relatively new imaging modality,
winning the 2014 Nobel Prize in Chemistry, and considered as one of the key super …

Single-molecule localization microscopy in eukaryotes

M Sauer, M Heilemann - Chemical reviews, 2017 - ACS Publications
Super-resolution fluorescence imaging by photoactivation or photoswitching of single
fluorophores and position determination (single-molecule localization microscopy, SMLM) …

Canonical T cell receptor docking on peptide–MHC is essential for T cell signaling

P Zareie, C Szeto, C Farenc, SD Gunasinghe… - Science, 2021 - science.org
INTRODUCTION T cell receptor (TCR) recognition of peptide–major histocompatibility
complexes (pMHCs) is one of the most diverse receptor–ligand interactions in biology …

[HTML][HTML] Super-resolution imaging of higher-order chromatin structures at different epigenomic states in single mammalian cells

J Xu, H Ma, J Jin, S Uttam, R Fu, Y Huang, Y Liu - Cell reports, 2018 - cell.com
Histone modifications influence higher-order chromatin structures at individual epigenomic
states and chromatin environments to regulate gene expression. However, genome-wide …

The human integrator complex facilitates transcriptional elongation by endonucleolytic cleavage of nascent transcripts

F Beckedorff, E Blumenthal, L Ferreira daSilva, Y Aoi… - Cell reports, 2020 - cell.com
Transcription by RNA polymerase II (RNAPII) is pervasive in the human genome. However,
the mechanisms controlling transcription at promoters and enhancers remain enigmatic …

Concentric organization of A-and B-type lamins predicts their distinct roles in the spatial organization and stability of the nuclear lamina

B Nmezi, J Xu, R Fu, TJ Armiger… - Proceedings of the …, 2019 - National Acad Sciences
The nuclear lamina is an intermediate filament meshwork adjacent to the inner nuclear
membrane (INM) that plays a critical role in maintaining nuclear shape and regulating gene …

About samples, giving examples: optimized single molecule localization microscopy

A Jimenez, K Friedl, C Leterrier - Methods, 2020 - Elsevier
Super-resolution microscopy has profoundly transformed how we study the architecture of
cells, revealing unknown structures and refining our view of cellular assemblies. Among the …

Atypical sideways recognition of CD1a by autoreactive γδ T cell receptors

M Wegrecki, TA Ocampo, SD Gunasinghe… - Nature …, 2022 - nature.com
CD1a is a monomorphic antigen-presenting molecule on dendritic cells that presents lipids
to αβ T cells. Whether CD1a represents a ligand for other immune receptors remains …

Digital pathology analysis quantifies spatial heterogeneity of CD3, CD4, CD8, CD20, and FoxP3 immune markers in triple-negative breast cancer

H Mi, C Gong, J Sulam, EJ Fertig, AS Szalay… - Frontiers in …, 2020 - frontiersin.org
Overwhelming evidence has shown the significant role of the tumor microenvironment (TME)
in governing the triple-negative breast cancer (TNBC) progression. Digital pathology can …