The next generation of CRISPR–Cas technologies and applications
A Pickar-Oliver, CA Gersbach - Nature reviews Molecular cell biology, 2019 - nature.com
The prokaryote-derived CRISPR–Cas genome editing systems have transformed our ability
to manipulate, detect, image and annotate specific DNA and RNA sequences in living cells …
to manipulate, detect, image and annotate specific DNA and RNA sequences in living cells …
Context is everything: aneuploidy in cancer
U Ben-David, A Amon - Nature Reviews Genetics, 2020 - nature.com
Cancer is driven by multiple types of genetic alterations, which range in size from point
mutations to whole-chromosome gains and losses, known as aneuploidy. Chromosome …
mutations to whole-chromosome gains and losses, known as aneuploidy. Chromosome …
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
C Hoencamp, O Dudchenko, AMO Elbatsh… - Science, 2021 - science.org
We investigated genome folding across the eukaryotic tree of life. We find two types of three-
dimensional (3D) genome architectures at the chromosome scale. Each type appears and …
dimensional (3D) genome architectures at the chromosome scale. Each type appears and …
EagleC: A deep-learning framework for detecting a full range of structural variations from bulk and single-cell contact maps
The Hi-C technique has been shown to be a promising method to detect structural variations
(SVs) in human genomes. However, algorithms that can use Hi-C data for a full-range SV …
(SVs) in human genomes. However, algorithms that can use Hi-C data for a full-range SV …
Accurate classification of BRCA1 variants with saturation genome editing
GM Findlay, RM Daza, B Martin, MD Zhang, AP Leith… - Nature, 2018 - nature.com
Variants of uncertain significance fundamentally limit the clinical utility of genetic information.
The challenge they pose is epitomized by BRCA1, a tumour suppressor gene in which …
The challenge they pose is epitomized by BRCA1, a tumour suppressor gene in which …
Efficient genome editing in filamentous fungus Trichoderma reesei using the CRISPR/Cas9 system
R Liu, L Chen, Y Jiang, Z Zhou, G Zou - Cell Discovery, 2015 - nature.com
Filamentous fungi have wide applications in biotechnology. The CRISPR/Cas9 system is a
powerful genome-editing method that facilitates genetic alterations of genomes in a variety …
powerful genome-editing method that facilitates genetic alterations of genomes in a variety …
Applications of the CRISPR–Cas9 system in cancer biology
FJ Sánchez-Rivera, T Jacks - Nature reviews cancer, 2015 - nature.com
The prokaryotic type II CRISPR–Cas9 (clustered regularly interspaced short palindromic
repeats–CRISPR-associated 9) system is rapidly revolutionizing the field of genetic …
repeats–CRISPR-associated 9) system is rapidly revolutionizing the field of genetic …
Glioblastoma mutations alter EGFR dimer structure to prevent ligand bias
The epidermal growth factor receptor (EGFR) is frequently mutated in human cancer,, and is
an important therapeutic target. EGFR inhibitors have been successful in lung cancer, where …
an important therapeutic target. EGFR inhibitors have been successful in lung cancer, where …
Applications of CRISPR–Cas systems in neuroscience
M Heidenreich, F Zhang - Nature Reviews Neuroscience, 2016 - nature.com
Genome-editing tools, and in particular those based on CRISPR–Cas (clustered regularly
interspaced short palindromic repeat (CRISPR)–CRISPR-associated protein) systems, are …
interspaced short palindromic repeat (CRISPR)–CRISPR-associated protein) systems, are …