Comprehensive catalog of currently documented histone modifications

Y Zhao, BA Garcia - Cold Spring Harbor perspectives in …, 2015 - cshperspectives.cshlp.org
Modern techniques in molecular biology, genomics, and mass spectrometry–based
proteomics have identified a large number of novel histone posttranslational modifications …

Is H3K4me3 instructive for transcription activation?

FS Howe, H Fischl, SC Murray, J Mellor - Bioessays, 2017 - Wiley Online Library
Tri‐methylation of lysine 4 on histone H3 (H3K4me3) is a near‐universal chromatin
modification at the transcription start site of active genes in eukaryotes from yeast to man …

An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer's disease

R Nativio, Y Lan, G Donahue, S Sidoli, A Berson… - Nature …, 2020 - nature.com
Protein aggregation is the hallmark of neurodegeneration, but the molecular mechanisms
underlying late-onset Alzheimer's disease (AD) are unclear. Here we integrated …

Methionine metabolism shapes T helper cell responses through regulation of epigenetic reprogramming

DG Roy, J Chen, V Mamane, EH Ma, BM Muhire… - Cell metabolism, 2020 - cell.com
Epigenetic modifications on DNA and histones regulate gene expression by modulating
chromatin accessibility to transcription machinery. Here we identify methionine as a key …

Epigenetic regulation of epithelial-mesenchymal transition: focusing on hypoxia and TGF-β signaling

YT Lin, KJ Wu - Journal of biomedical science, 2020 - Springer
Epithelial-mesenchymal transition (EMT) is an important process triggered during cancer
metastasis. Regulation of EMT is mostly initiated by outside signalling, including TGF-β …

Quantitative proteomic analysis of histone modifications

H Huang, S Lin, BA Garcia, Y Zhao - Chemical reviews, 2015 - ACS Publications
Several mechanisms have been proposed for histone marks to exert their functions,
including altering the physical properties of nucleosomes by neutralization of charge via …

Histone chaperones in nucleosome assembly and human disease

RJ Burgess, Z Zhang - Nature structural & molecular biology, 2013 - nature.com
Nucleosome assembly following DNA replication, DNA repair and gene transcription is
critical for the maintenance of genome stability and epigenetic information. Nucleosomes …

The lncRNA GATA6-AS epigenetically regulates endothelial gene expression via interaction with LOXL2

P Neumann, N Jaé, A Knau, SF Glaser… - Nature …, 2018 - nature.com
Impaired or excessive growth of endothelial cells contributes to several diseases. However,
the functional involvement of regulatory long non-coding RNAs in these processes is not …

Suppression of the antiviral response by an influenza histone mimic

I Marazzi, JSY Ho, J Kim, B Manicassamy, S Dewell… - Nature, 2012 - nature.com
Viral infection is commonly associated with virus-driven hijacking of host proteins. Here we
describe a novel mechanism by which influenza virus affects host cells through the …

Cfp1 integrates both CpG content and gene activity for accurate H3K4me3 deposition in embryonic stem cells

T Clouaire, S Webb, P Skene, R Illingworth… - Genes & …, 2012 - genesdev.cshlp.org
Trimethylation of histone H3 Lys 4 (H3K4me3) is a mark of active and poised promoters. The
Set1 complex is responsible for most somatic H3K4me3 and contains the conserved subunit …