Coupling eco‐evolutionary mechanisms with deep‐time environmental dynamics to understand biodiversity patterns
O Hagen - Ecography, 2023 - Wiley Online Library
Pioneer naturalists such as Whewell, Lyell, Humboldt, Darwin and Wallace acknowledged
the interactions between ecological and evolutionary forces, as well as the roles of …
the interactions between ecological and evolutionary forces, as well as the roles of …
Evolutionary patterns and processes: lessons from ancient DNA
M Leonardi, P Librado, C Der Sarkissian… - Systematic …, 2017 - academic.oup.com
Ever since its emergence in 1984, the field of ancient DNA has struggled to overcome the
challenges related to the decay of DNA molecules in the fossil record. With the recent …
challenges related to the decay of DNA molecules in the fossil record. With the recent …
[图书][B] Phylogeny: discrete and random processes in evolution
M Steel - 2016 - SIAM
The idea that all life on earth traces back to a common origin dates back at least to Charles
Darwin's Origin of Species. Ever since, biologists have tried to piece together parts of this …
Darwin's Origin of Species. Ever since, biologists have tried to piece together parts of this …
Bayesian total-evidence dating reveals the recent crown radiation of penguins
The total-evidence approach to divergence time dating uses molecular and morphological
data from extant and fossil species to infer phylogenetic relationships, species divergence …
data from extant and fossil species to infer phylogenetic relationships, species divergence …
Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating
Background Bayesian relaxed-clock dating has significantly influenced our understanding of
the timeline of biotic evolution. This approach requires the use of priors on the branching …
the timeline of biotic evolution. This approach requires the use of priors on the branching …
gen3sis: A gen eral e ngine for e co-e volutionary si mulation s of the processes that shape Earth's biodiversity
Understanding the origins of biodiversity has been an aspiration since the days of early
naturalists. The immense complexity of ecological, evolutionary, and spatial processes …
naturalists. The immense complexity of ecological, evolutionary, and spatial processes …
Evaluating the impact of genomic data and priors on Bayesian estimates of the angiosperm evolutionary timescale
The evolutionary timescale of angiosperms has long been a key question in biology.
Molecular estimates of this timescale have shown considerable variation, being influenced …
Molecular estimates of this timescale have shown considerable variation, being influenced …
Restart could optimize the probability of success in a Bernoulli trial
S Belan - Physical review letters, 2018 - APS
The recently noticed ability of restart to reduce the expected completion time of first-passage
processes allows appealing opportunities for performance improvement in a variety of …
processes allows appealing opportunities for performance improvement in a variety of …
Advances in computational methods for phylogenetic networks in the presence of hybridization
Phylogenetic networks extend phylogenetic trees to allow for modeling reticulate
evolutionary processes such as hybridization. They take the shape of a rooted, directed …
evolutionary processes such as hybridization. They take the shape of a rooted, directed …
Unifying phylogenetic birth–death models in epidemiology and macroevolution
Birth–death stochastic processes are the foundations of many phylogenetic models and are
widely used to make inferences about epidemiological and macroevolutionary dynamics …
widely used to make inferences about epidemiological and macroevolutionary dynamics …