Nanopore targeted sequencing for the accurate and comprehensive detection of SARS‐CoV‐2 and other respiratory viruses
M Wang, A Fu, B Hu, Y Tong, R Liu, Z Liu, J Gu… - Small, 2020 - Wiley Online Library
The ongoing global novel coronavirus pneumonia COVID‐19 outbreak has engendered
numerous cases of infection and death. COVID‐19 diagnosis relies upon nucleic acid …
numerous cases of infection and death. COVID‐19 diagnosis relies upon nucleic acid …
Future potential of metagenomics in microbiology laboratories
Rapid and sensitive diagnostic strategies are necessary for patient care and public health.
Most of the current conventional microbiological assays detect only a restricted panel of …
Most of the current conventional microbiological assays detect only a restricted panel of …
Focus on using nanopore technology for societal health, environmental, and energy challenges
With an increasing global population that is rapidly ageing, our society faces challenges that
impact health, environment, and energy demand. With this ageing comes an accumulation …
impact health, environment, and energy demand. With this ageing comes an accumulation …
Emergence and potential extinction of genetic lineages of human metapneumovirus between 2005 and 2021
K Groen, S van Nieuwkoop, A Meijer, B van der Veer… - Mbio, 2023 - Am Soc Microbiol
Human metapneumovirus (HMPV) is one of the leading causes of respiratory illness (RI),
primarily in infants. Worldwide, two genetic lineages (A and B) of HMPV are circulating that …
primarily in infants. Worldwide, two genetic lineages (A and B) of HMPV are circulating that …
Long-reads-based metagenomics in clinical diagnosis with a special focus on fungal infections
Identification of the causative infectious agent is essential in the management of infectious
diseases, with the ideal diagnostic method being rapid, accurate, and informative, while …
diseases, with the ideal diagnostic method being rapid, accurate, and informative, while …
Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq
D Tshiabuila, J Giandhari, S Pillay, U Ramphal… - BMC genomics, 2022 - Springer
Abstract Background Over 4 million SARS-CoV-2 genomes have been sequenced globally
in the past 2 years. This has been crucial in elucidating transmission chains within …
in the past 2 years. This has been crucial in elucidating transmission chains within …
Nanopore metagenomic sequencing of influenza virus directly from respiratory samples: diagnosis, drug resistance and nosocomial transmission, United Kingdom …
Background Influenza virus presents a considerable challenge to public health by causing
seasonal epidemics and occasional pandemics. Nanopore metagenomic sequencing has …
seasonal epidemics and occasional pandemics. Nanopore metagenomic sequencing has …
The future of livestock management: a review of real-time portable sequencing applied to livestock
Oxford Nanopore Technologies' MinION has proven to be a valuable tool within human and
microbial genetics. Its capacity to produce long reads in real time has opened up unique …
microbial genetics. Its capacity to produce long reads in real time has opened up unique …
Detection of Biological Molecules Using Nanopore Sensing Techniques
Modern biomedical sensing techniques have significantly increased in precision and
accuracy due to new technologies that enable speed and that can be tailored to be highly …
accuracy due to new technologies that enable speed and that can be tailored to be highly …
NanoSPC: a scalable, portable, cloud compatible viral nanopore metagenomic data processing pipeline
Y Xu, F Yang-Turner, D Volk, D Crook - Nucleic Acids Research, 2020 - academic.oup.com
Metagenomic sequencing combined with Oxford Nanopore Technology has the potential to
become a point-of-care test for infectious disease in public health and clinical settings …
become a point-of-care test for infectious disease in public health and clinical settings …