Clostridioides difficile toxins: mechanisms of action and antitoxin therapeutics

SL Kordus, AK Thomas, DB Lacy - Nature Reviews Microbiology, 2022 - nature.com
Clostridioides difficile is a Gram-positive anaerobe that can cause a spectrum of disorders
that range in severity from mild diarrhoea to fulminant colitis and/or death. The bacterium …

Within-host evolution of bacterial pathogens

X Didelot, AS Walker, TE Peto, DW Crook… - Nature Reviews …, 2016 - nature.com
Whole-genome sequencing has opened the way for investigating the dynamics and
genomic evolution of bacterial pathogens during the colonization and infection of humans …

[HTML][HTML] Longitudinal genomic surveillance of carriage and transmission of Clostridioides difficile in an intensive care unit

A Miles-Jay, ES Snitkin, MY Lin, T Shimasaki… - Nature Medicine, 2023 - nature.com
Despite enhanced infection prevention efforts, Clostridioides difficile remains the leading
cause of healthcare-associated infections in the United States. Current prevention strategies …

[HTML][HTML] Adaptive evolution within gut microbiomes of healthy people

S Zhao, TD Lieberman, M Poyet, KM Kauffman… - Cell host & …, 2019 - cell.com
Natural selection shapes bacterial evolution in all environments. However, the extent to
which commensal bacteria diversify and adapt within the human gut remains unclear. Here …

[HTML][HTML] ClonalFrameML: efficient inference of recombination in whole bacterial genomes

X Didelot, DJ Wilson - PLoS computational biology, 2015 - journals.plos.org
Recombination is an important evolutionary force in bacteria, but it remains challenging to
reconstruct the imports that occurred in the ancestry of a genomic sample. Here we present …

[HTML][HTML] SRST2: Rapid genomic surveillance for public health and hospital microbiology labs

M Inouye, H Dashnow, LA Raven, MB Schultz… - Genome medicine, 2014 - Springer
Rapid molecular typing of bacterial pathogens is critical for public health epidemiology,
surveillance and infection control, yet routine use of whole genome sequencing (WGS) for …

Clostridium difficile infection: epidemiology, diagnosis and understanding transmission

JSH Martin, TM Monaghan, MH Wilcox - … reviews Gastroenterology & …, 2016 - nature.com
Clostridium difficile infection (CDI) continues to affect patients in hospitals and communities
worldwide. The spectrum of clinical disease ranges from mild diarrhoea to toxic megacolon …

Diverse Sources of C. difficile Infection Identified on Whole-Genome Sequencing

DW Eyre, ML Cule, DJ Wilson, D Griffiths… - … England Journal of …, 2013 - Mass Medical Soc
Background It has been thought that Clostridium difficile infection is transmitted
predominantly within health care settings. However, endemic spread has hampered …

[HTML][HTML] Effects of control interventions on Clostridium difficile infection in England: an observational study

KE Dingle, X Didelot, TP Quan, DW Eyre… - The Lancet Infectious …, 2017 - thelancet.com
Summary Background The control of Clostridium difficile infections is an international clinical
challenge. The incidence of C difficile in England declined by roughly 80% after 2006 …

Current and emerging Legionella diagnostics for laboratory and outbreak investigations

JW Mercante, JM Winchell - Clinical microbiology reviews, 2015 - Am Soc Microbiol
Legionnaires' disease (LD) is an often severe and potentially fatal form of bacterial
pneumonia caused by an extensive list of Legionella species. These ubiquitous freshwater …