Iron–sulphur clusters in nucleic acid processing enzymes

MF White, MS Dillingham - Current opinion in structural biology, 2012 - Elsevier
Several unexpected reports of iron–sulphur clusters in nucleic acid binding proteins have
recently appeared in the literature. Once thought to be relatively rare in these systems, iron …

G-quadruplex recognition and remodeling by the FANCJ helicase

CG Wu, M Spies - Nucleic acids research, 2016 - academic.oup.com
Guanine rich nucleic acid sequences can form G-quadruplex (G4) structures that interfere
with DNA replication, repair and RNA transcription. The human FANCJ helicase contributes …

Two steps forward, one step back: determining XPD helicase mechanism by single-molecule fluorescence and high-resolution optical tweezers

M Spies - DNA repair, 2014 - Elsevier
XPD-like helicases constitute a prominent DNA helicase family critical for many aspects of
genome maintenance. These enzymes share a unique structural feature, an auxiliary …

EGFR-targeted cellular delivery of therapeutic nucleic acids mediated by boron clusters

D Kaniowski, J Suwara, K Ebenryter-Olbińska… - International Journal of …, 2022 - mdpi.com
New boron carriers with high boron content and targeted cancer-cell delivery are considered
the first choice for boron neutron capture therapy (BNCT) for cancer treatment. Previously …

Direct correlation of DNA binding and single protein domain motion via dual illumination fluorescence microscopy

M Ghoneim, M Spies - Nano Letters, 2014 - ACS Publications
We report a dual illumination, single-molecule imaging strategy to dissect directly and in real-
time the correlation between nanometer-scale domain motion of a DNA repair protein and its …

Structure and mechanisms of SF2 DNA helicases

DC Beyer, MK Ghoneim, M Spies - DNA Helicases and DNA Motor …, 2012 - Springer
Effective transcription, replication, and maintenance of the genome require a diverse set of
molecular machines to perform the many chemical transactions that constitute these …

KERA: analysis tool for multi-process, multi-state single-molecule data

J Tibbs, M Ghoneim, CC Caldwell… - Nucleic acids …, 2021 - academic.oup.com
Molecular machines within cells dynamically assemble, disassemble and reorganize.
Molecular interactions between their components can be observed at the single-molecule …

The N-terminal domain of the Drosophila mitochondrial replicative DNA helicase contains an iron-sulfur cluster and binds DNA

J Stiban, GA Farnum, SL Hovde, LS Kaguni - Journal of Biological …, 2014 - ASBMB
The metazoan mitochondrial DNA helicase is an integral part of the minimal mitochondrial
replisome. It exhibits strong sequence homology with the bacteriophage T7 gene 4 protein …

Characterization of the Escherichia coli XPD/Rad3 iron-sulfur helicase YoaA in complex with the DNA polymerase III clamp loader subunit chi (χ)

SJ Weeks-Pollenz, Y Ali, LA Morris, VA Sutera… - Journal of Biological …, 2023 - ASBMB
Escherichia coli YoaA aids in the resolution of DNA damage that halts DNA synthesis in vivo
in conjunction with χ, an accessory subunit of DNA polymerase III. YoaA and χ form a …

Single-molecule dynamics and mechanisms of metalloregulators and metallochaperones

P Chen, AM Keller, CP Joshi, DJ Martell, NM Andoy… - Biochemistry, 2013 - ACS Publications
Understanding how cells regulate and transport metal ions is an important goal in the field of
bioinorganic chemistry, a frontier research area that resides at the interface of chemistry and …