Bioorthogonal chemistry

SL Scinto, DA Bilodeau, R Hincapie, W Lee… - Nature Reviews …, 2021 - nature.com
Bioorthogonal chemistry represents a class of high-yielding chemical reactions that proceed
rapidly and selectively in biological environments without side reactions towards …

Xanthene, cyanine, oxazine and BODIPY: the four pillars of the fluorophore empire for super-resolution bioimaging

S Samanta, K Lai, F Wu, Y Liu, S Cai, X Yang… - Chemical Society …, 2023 - pubs.rsc.org
In the realm of biological research, the invention of super-resolution microscopy (SRM) has
enabled the visualization of ultrafine sub-cellular structures and their functions in live cells at …

Spatiotemporal multiplexed immunofluorescence imaging of living cells and tissues with bioorthogonal cycling of fluorescent probes

J Ko, M Wilkovitsch, J Oh, RH Kohler, E Bolli… - Nature …, 2022 - nature.com
Cells in complex organisms undergo frequent functional changes, but few methods allow
comprehensive longitudinal profiling of living cells. Here we introduce scission-accelerated …

Uncovering the key role of distortion in bioorthogonal tetrazine tools that defy the reactivity/stability trade-off

D Svatunek, M Wilkovitsch, L Hartmann… - Journal of the …, 2022 - ACS Publications
The tetrazine/trans-cyclooctene ligation stands out from the bioorthogonal toolbox due to its
exceptional reaction kinetics, enabling multiple molecular technologies in vitro and in living …

Spontaneously Blinking Rhodamine Dyes for Single‐Molecule Localization Microscopy

W Chi, D Tan, Q Qiao, Z Xu, X Liu - … Chemie International Edition, 2023 - Wiley Online Library
Single‐molecule localization microscopy (SMLM) has found extensive applications in
various fields of biology and chemistry. As a vital component of SMLM, fluorophores play an …

Bioorthogonally activatable cyanine dye with torsion-induced disaggregation for in vivo tumor imaging

X Zhang, J Gao, Y Tang, J Yu, SS Liew, C Qiao… - Nature …, 2022 - nature.com
Advancement of bioorthogonal chemistry in molecular optical imaging lies in expanding the
repertoire of fluorophores that can undergo fluorescence signal changes upon …

Photochemical mechanisms of fluorophores employed in single‐molecule localization microscopy

K Kikuchi, LD Adair, J Lin, EJ New… - Angewandte Chemie, 2023 - Wiley Online Library
Decoding cellular processes requires visualization of the spatial distribution and dynamic
interactions of biomolecules. It is therefore not surprising that innovations in imaging …

Overcoming Spectral Dependence: A General Strategy for Developing Far‐Red and Near‐Infrared Ultra‐Fluorogenic Tetrazine Bioorthogonal Probes

W Mao, W Chi, X He, C Wang, X Wang… - Angewandte …, 2022 - Wiley Online Library
Bioorthogonal fluorogenic dyes are indispensable tools in wash‐free bioimaging of specific
biological targets. However, the fluorogenicity of existing tetrazine‐based bioorthogonal …

Recruiting rate determines the blinking propensity of rhodamine fluorophores for super-resolution imaging

Y Zheng, Z Ye, X Zhang, Y Xiao - Journal of the American …, 2023 - ACS Publications
Live-cell single-molecule localization microscopy has advanced with the development of self-
blinking rhodamines. A p K cycling of< 6 is recognized as the criterion for self-blinking, yet a …

Bio-orthogonal red and far-red fluorogenic probes for wash-free live-cell and super-resolution microscopy

P Werther, K Yserentant, F Braun… - ACS central …, 2021 - ACS Publications
Small-molecule fluorophores enable the observation of biomolecules in their native context
with fluorescence microscopy. Specific labeling via bio-orthogonal tetrazine chemistry …