Toward telomere-to-telomere cat genomes for precision medicine and conservation biology

WJ Murphy, AJ Harris - Genome Research, 2024 - genome.cshlp.org
Genomic data from species of the cat family Felidae promise to stimulate veterinary and
human medical advances, and clarify the coherence of genome organization. We describe …

Environmental drivers of megafauna and hominin extinction in Southeast Asia

J Louys, P Roberts - Nature, 2020 - nature.com
Southeast Asia has emerged as an important region for understanding hominin and
mammalian migrations and extinctions. High-profile discoveries have shown that Southeast …

Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

SST Mak, S Gopalakrishnan, C Carøe, C Geng… - …, 2017 - academic.oup.com
Ancient DNA research has been revolutionized following development of next-generation
sequencing platforms. Although a number of such platforms have been applied to ancient …

Dwarfism and gigantism drive human-mediated extinctions on islands

R Rozzi, MV Lomolino, AAE van der Geer, D Silvestro… - Science, 2023 - science.org
Islands have long been recognized as distinctive evolutionary arenas leading to
morphologically divergent species, such as dwarfs and giants. We assessed how body size …

Mid-sized felids threatened by habitat degradation in Southeast Asia

H Decœur, Z Amir, CP Mendes, JH Moore… - Biological …, 2023 - Elsevier
Deforestation and poaching in Southeast Asia have driven a stark decline in the region's
apex predators, including large felids like tigers and leopards. Meanwhile, some small felids …

Extensive Phylogenomic Discordance and the Complex Evolutionary History of the Neotropical Cat Genus Leopardus

J Lescroart, A Bonilla-Sánchez… - Molecular Biology …, 2023 - academic.oup.com
Even in the genomics era, the phylogeny of Neotropical small felids comprised in the genus
Leopardus remains contentious. We used whole-genome resequencing data to construct a …

An expanded mammal mitogenome dataset from Southeast Asia

F Mohd Salleh, J Ramos-Madrigal, F Penaloza… - …, 2017 - academic.oup.com
Southeast (SE) Asia is 1 of the most biodiverse regions in the world, and it holds
approximately 20% of all mammal species. Despite this, the majority of SE Asia's genetic …

Genetic Structure and Phylogeography of the Leopard Cat (Prionailurus bengalensis) Inferred from Mitochondrial Genomes

RP Patel, S Wutke, D Lenz, S Mukherjee… - Journal of …, 2017 - academic.oup.com
Abstract The Leopard cat Prionailurus bengalensis is a habitat generalist that is widely
distributed across Southeast Asia. Based on morphological traits, this species has been …

Genetic analysis of endangered hog deer (Axis porcinus) reveals two distinct lineages from the Indian subcontinent

SK Gupta, A Kumar, S Angom, B Singh, MGU Ghazi… - Scientific reports, 2018 - nature.com
The hog deer (Axis porcinus) is threatened by habitat alteration, fragmentation, and
poaching, which have led to a drastic decline of its wild population. Two subspecies of A …

Creating genetic reference datasets: Indirect sampling of target species using terrestrial leeches as sample “collectors”

A Wilting, TV Nguyen, J Axtner, A Nguyen… - Environmental …, 2022 - Wiley Online Library
Sampling genetic material from rare and often secretive mammals can be difficult in
challenging environments such as tropical rainforests. Large‐scale sampling is important …