R loops: new modulators of genome dynamics and function
JM Santos-Pereira, A Aguilera - Nature Reviews Genetics, 2015 - nature.com
R loops are nucleic acid structures composed of an RNA–DNA hybrid and a displaced
single-stranded DNA. Recently, evidence has emerged that R loops occur more often in the …
single-stranded DNA. Recently, evidence has emerged that R loops occur more often in the …
Satellite DNA: an evolving topic
MA Garrido-Ramos - Genes, 2017 - mdpi.com
Satellite DNA represents one of the most fascinating parts of the repetitive fraction of the
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …
Telomere length determines TERRA and R-loop regulation through the cell cycle
M Graf, D Bonetti, A Lockhart, K Serhal, V Kellner… - Cell, 2017 - cell.com
Maintenance of a minimal telomere length is essential to prevent cellular senescence. When
critically short telomeres arise in the absence of telomerase, they can be repaired by …
critically short telomeres arise in the absence of telomerase, they can be repaired by …
Transcription-mediated replication hindrance: a major driver of genome instability
B Gómez-González, A Aguilera - Genes & development, 2019 - genesdev.cshlp.org
Genome replication involves dealing with obstacles that can result from DNA damage but
also from chromatin alterations, topological stress, tightly bound proteins or non-B DNA …
also from chromatin alterations, topological stress, tightly bound proteins or non-B DNA …
R loops: from transcription byproducts to threats to genome stability
A Aguilera, T García-Muse - Molecular cell, 2012 - cell.com
RNA: DNA hybrid structures known as R loops were thought to be rare byproducts of
transcription. In the last decade, however, accumulating evidence has pointed to a new view …
transcription. In the last decade, however, accumulating evidence has pointed to a new view …
Telomeres: protecting chromosomes against genome instability
RJ O'sullivan, J Karlseder - Nature reviews Molecular cell biology, 2010 - nature.com
The natural ends of linear chromosomes require unique genetic and structural adaptations
to facilitate the protection of genetic material. This is achieved by the sequestration of the …
to facilitate the protection of genetic material. This is achieved by the sequestration of the …
[HTML][HTML] The many pathways of RNA degradation
J Houseley, D Tollervey - Cell, 2009 - cell.com
From the earliest comparisons of RNA production with steady-state levels, it has been clear
that cells transcribe more RNA than they accumulate, implying the existence of active RNA …
that cells transcribe more RNA than they accumulate, implying the existence of active RNA …
XRN 5′→ 3′ exoribonucleases: structure, mechanisms and functions
VK Nagarajan, CI Jones, SF Newbury… - Biochimica et Biophysica …, 2013 - Elsevier
The XRN family of 5′→ 3′ exoribonucleases is critical for ensuring the fidelity of cellular
RNA turnover in eukaryotes. Highly conserved across species, the family is typically …
RNA turnover in eukaryotes. Highly conserved across species, the family is typically …
The application of DNA and RNA G-quadruplexes to therapeutic medicines
GW Collie, GN Parkinson - Chemical Society Reviews, 2011 - pubs.rsc.org
The intriguing structural diversity in folded topologies available to guanine-rich nucleic acid
repeat sequences have made four-stranded G-quadruplex structures the focus of both basic …
repeat sequences have made four-stranded G-quadruplex structures the focus of both basic …
RNA Degradation in Saccharomyces cerevisae
R Parker - Genetics, 2012 - academic.oup.com
All RNA species in yeast cells are subject to turnover. Work over the past 20 years has
defined degradation mechanisms for messenger RNAs, transfer RNAs, ribosomal RNAs …
defined degradation mechanisms for messenger RNAs, transfer RNAs, ribosomal RNAs …