DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations
Predicting the effect of missense variations on protein stability and dynamics is important for
understanding their role in diseases, and the link between protein structure and function …
understanding their role in diseases, and the link between protein structure and function …
Systematic evaluation of computational tools to predict the effects of mutations on protein stability in the absence of experimental structures
Abstract Changes in protein sequence can have dramatic effects on how proteins fold, their
stability and dynamics. Over the last 20 years, pioneering methods have been developed to …
stability and dynamics. Over the last 20 years, pioneering methods have been developed to …
[HTML][HTML] Monitoring Plasmodium vivax resistance to antimalarials: Persisting challenges and future directions
Emerging antimalarial drug resistance may undermine current efforts to control and
eliminate Plasmodium vivax, the most geographically widespread yet neglected human …
eliminate Plasmodium vivax, the most geographically widespread yet neglected human …
SDM: a server for predicting effects of mutations on protein stability
AP Pandurangan, B Ochoa-Montano… - Nucleic acids …, 2017 - academic.oup.com
Here, we report a webserver for the improved SDM, used for predicting the effects of
mutations on protein stability. As a pioneering knowledge-based approach, SDM has been …
mutations on protein stability. As a pioneering knowledge-based approach, SDM has been …
Single-Dose Tafenoquine to Prevent Relapse of Plasmodium vivax Malaria
MVG Lacerda, A Llanos-Cuentas… - … England Journal of …, 2019 - Mass Medical Soc
Abstract Background Treatment of Plasmodium vivax malaria requires the clearing of
asexual parasites, but relapse can be prevented only if dormant hypnozoites are cleared …
asexual parasites, but relapse can be prevented only if dormant hypnozoites are cleared …
Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam
To examine the transmission dynamics of Mycobacterium tuberculosis (Mtb) isolated from
tuberculosis patients in Ho Chi Minh City, Vietnam, we sequenced the whole genomes of …
tuberculosis patients in Ho Chi Minh City, Vietnam, we sequenced the whole genomes of …
mCSM-membrane: predicting the effects of mutations on transmembrane proteins
DEV Pires, CHM Rodrigues… - Nucleic Acids Research, 2020 - academic.oup.com
Significant efforts have been invested into understanding and predicting the molecular
consequences of mutations in protein coding regions, however nearly all approaches have …
consequences of mutations in protein coding regions, however nearly all approaches have …
mCSM–NA: predicting the effects of mutations on protein–nucleic acids interactions
Over the past two decades, several computational methods have been proposed to predict
how missense mutations can affect protein structure and function, either by altering protein …
how missense mutations can affect protein structure and function, either by altering protein …
Structure guided prediction of Pyrazinamide resistance mutations in pncA
Pyrazinamide plays an important role in tuberculosis treatment; however, its use is
complicated by side-effects and challenges with reliable drug susceptibility testing …
complicated by side-effects and challenges with reliable drug susceptibility testing …
mCSM-AB2: guiding rational antibody design using graph-based signatures
Motivation A lack of accurate computational tools to guide rational mutagenesis has made
affinity maturation a recurrent challenge in antibody (Ab) development. We previously …
affinity maturation a recurrent challenge in antibody (Ab) development. We previously …