Phage therapy: what have we learned?

A Górski, R Międzybrodzki, M Łobocka… - Viruses, 2018 - mdpi.com
In this article we explain how current events in the field of phage therapy may positively
influence its future development. We discuss the shift in position of the authorities …

An expanded CRISPR–Cas9-assisted recombineering toolkit for engineering genetically intractable Pseudomonas aeruginosa isolates

D Pankratz, NO Gomez, A Nielsen, A Mustafayeva… - Nature protocols, 2023 - nature.com
Much of our current understanding of microbiology is based on the application of genetic
engineering procedures. Since their inception (more than 30 years ago), methods based …

Precision-engineering the Pseudomonas aeruginosa genome with two-step allelic exchange

LR Hmelo, BR Borlee, H Almblad, ME Love… - Nature protocols, 2015 - nature.com
Allelic exchange is an efficient method of bacterial genome engineering. This protocol
describes the use of this technique to make gene knockouts and knock-ins, as well as single …

Extracellular DNA shields against aminoglycosides in Pseudomonas aeruginosa biofilms

WC Chiang, M Nilsson, PØ Jensen… - Antimicrobial agents …, 2013 - Am Soc Microbiol
Within recent years, it has been established that extracellular DNA is a key constituent of the
matrix of microbial biofilms. In addition, it has recently been demonstrated that DNA binds …

Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota

Y Zhu, E Jameson, M Crosatti… - Proceedings of the …, 2014 - National Acad Sciences
Dietary intake of l-carnitine can promote cardiovascular diseases in humans through
microbial production of trimethylamine (TMA) and its subsequent oxidation to trimethylamine …

The evolution of short-and long-range weapons for bacterial competition

SC Booth, WPJ Smith, KR Foster - Nature Ecology & Evolution, 2023 - nature.com
Bacteria possess a diverse range of mechanisms for inhibiting competitors, including
bacteriocins, tailocins, type VI secretion systems and contact-dependent inhibition (CDI) …

Tolerance to the antimicrobial peptide colistin in Pseudomonas aeruginosa biofilms is linked to metabolically active cells, and depends on the pmr and mexAB‐oprM …

SJ Pamp, M Gjermansen, HK Johansen… - Molecular …, 2008 - Wiley Online Library
Bacteria living as biofilm are frequently reported to exhibit inherent tolerance to antimicrobial
compounds, and might therefore contribute to the persistence of infections. Antimicrobial …

Roles of type IV pili, flagellum‐mediated motility and extracellular DNA in the formation of mature multicellular structures in Pseudomonas aeruginosa biofilms

KB Barken, SJ Pamp, L Yang… - Environmental …, 2008 - Wiley Online Library
When grown as a biofilm in laboratory flow chambers Pseudomonas aeruginosa can
develop mushroom‐shaped multicellular structures consisting of distinct subpopulations in …

Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome hibernation factors in the antibiotic-tolerant subpopulation and hypoxia-induced …

KS Williamson, LA Richards… - Journal of …, 2012 - Am Soc Microbiol
Bacteria growing in biofilms are physiologically heterogeneous, due in part to their
adaptation to local environmental conditions. Here, we characterized the local transcriptome …

The biofilm life cycle and virulence of Pseudomonas aeruginosa are dependent on a filamentous prophage

SA Rice, CH Tan, PJ Mikkelsen, V Kung, J Woo… - The ISME …, 2009 - academic.oup.com
Mature Pseudomonas aeruginosa biofilms undergo specific developmental events. Using a
bacteriophage mutant, generated by deletion of the entire filamentous Pf4 prophage, we …