Emerging roles for 3′ UTRs in neurons

B Bae, P Miura - International Journal of Molecular Sciences, 2020 - mdpi.com
The 3′ untranslated regions (3′ UTRs) of mRNAs serve as hubs for post-transcriptional
control as the targets of microRNAs (miRNAs) and RNA-binding proteins (RBPs) …

The emerging roles of CFIm25 (NUDT21/CPSF5) in human biology and disease

CP Masamha - Wiley Interdisciplinary Reviews: RNA, 2023 - Wiley Online Library
The mammalian cleavage factor I subunit CFIm25 (NUDT21) binds to the UGUA sequences
of precursor RNAs. Traditionally, CFIm25 is known to facilitate 3′ end formation of pre …

Reconstitution of 3′ end processing of mammalian pre-mRNA reveals a central role of RBBP6

M Schmidt, F Kluge, F Sandmeir, U Kühn… - Genes & …, 2022 - genesdev.cshlp.org
The 3′ ends of almost all eukaryotic mRNAs are generated in an essential two-step
processing reaction: endonucleolytic cleavage of an extended precursor followed by the …

Maturation of Purkinje cell firing properties relies on neurogenesis of excitatory neurons

ME van der Heijden, EP Lackey, R Perez, FS Ișleyen… - Elife, 2021 - elifesciences.org
Preterm infants that suffer cerebellar insults often develop motor disorders and cognitive
difficulty. Excitatory granule cells, the most numerous neuron type in the brain, are especially …

Alternative polyadenylation alters protein dosage by switching between intronic and 3′ UTR sites

N de Prisco, C Ford, ND Elrod, W Lee, LC Tang… - Science …, 2023 - science.org
Alternative polyadenylation (APA) creates distinct transcripts from the same gene by
cleaving the pre-mRNA at poly (A) sites that can lie within the 3′ untranslated region (3 …

Alternative polyadenylation: An enigma of transcript length variation in health and disease

NK Mohanan, F Shaji, GR Koshre… - Wiley Interdisciplinary …, 2022 - Wiley Online Library
Alternative polyadenylation (APA) is a molecular mechanism during a pre‐mRNA
processing that involves usage of more than one polyadenylation site (PA‐site) generating …

Differential alternative polyadenylation of homoeologous genes of allohexaploid wheat ABD subgenomes during drought stress response

H Ma, J Lin, F Mei, H Mao, QQ Li - The Plant Journal, 2023 - Wiley Online Library
Because allohexaploid wheat genome contains ABD subgenomes, how the expression of
homoeologous genes is coordinated remains largely unknown, particularly at the co …

PolyA-miner: Accurate assessment of differential alternative poly-adenylation from 3′ Seq data using vector projections and non-negative matrix factorization

HK Yalamanchili, CE Alcott, P Ji… - Nucleic acids …, 2020 - academic.oup.com
Almost 70% of human genes undergo alternative polyadenylation (APA) and generate
mRNA transcripts with varying lengths, typically of the 3′ untranslated regions (UTR). APA …

NUDT21 alters glioma migration through differential alternative polyadenylation of LAMC1

VS Jonnakuti, P Ji, Y Gao, A Lin, Y Chu, N Elrod… - Journal of Neuro …, 2023 - Springer
Purpose Gliomas and their surrounding microenvironment constantly interact to promote
tumorigenicity, yet the underlying posttranscriptional regulatory mechanisms that govern this …

RNAseq Analysis of FABP4 Knockout Mouse Hippocampal Transcriptome Suggests a Role for WNT/β-Catenin in Preventing Obesity-Induced Cognitive Impairment

SW So, JP Nixon, DA Bernlohr, TA Butterick - International journal of …, 2023 - mdpi.com
Microglial fatty-acid binding protein 4 (FABP4) is a regulator of neuroinflammation. We
hypothesized that the link between lipid metabolism and inflammation indicates a role for …