Data-driven multiscale computational models of cortical and subcortical regions
S Ramaswamy - Current opinion in neurobiology, 2024 - Elsevier
Data-driven computational models of neurons, synapses, microcircuits, and mesocircuits
have become essential tools in modern brain research. The goal of these multiscale models …
have become essential tools in modern brain research. The goal of these multiscale models …
2022 roadmap on neuromorphic computing and engineering
DV Christensen, R Dittmann… - Neuromorphic …, 2022 - iopscience.iop.org
Modern computation based on von Neumann architecture is now a mature cutting-edge
science. In the von Neumann architecture, processing and memory units are implemented …
science. In the von Neumann architecture, processing and memory units are implemented …
[HTML][HTML] Reconstruction and simulation of neocortical microcircuitry
We present a first-draft digital reconstruction of the microcircuitry of somatosensory cortex of
juvenile rat. The reconstruction uses cellular and synaptic organizing principles to …
juvenile rat. The reconstruction uses cellular and synaptic organizing principles to …
[HTML][HTML] Cliques of neurons bound into cavities provide a missing link between structure and function
The lack of a formal link between neural network structure and its emergent function has
hampered our understanding of how the brain processes information. We have now come …
hampered our understanding of how the brain processes information. We have now come …
[HTML][HTML] Simulation of transcranial magnetic stimulation in head model with morphologically-realistic cortical neurons
Background Transcranial magnetic stimulation (TMS) enables non-invasive modulation of
brain activity with both clinical and research applications, but fundamental questions remain …
brain activity with both clinical and research applications, but fundamental questions remain …
Modeling the cerebellar microcircuit: new strategies for a long-standing issue
The cerebellar microcircuit has been the work bench for theoretical and computational
modeling since the beginning of neuroscientific research. The regular neural architecture of …
modeling since the beginning of neuroscientific research. The regular neural architecture of …
SpikeInterface, a unified framework for spike sorting
AP Buccino, CL Hurwitz, S Garcia, J Magland… - Elife, 2020 - elifesciences.org
Much development has been directed toward improving the performance and automation of
spike sorting. This continuous development, while essential, has contributed to an over …
spike sorting. This continuous development, while essential, has contributed to an over …
Truncated proposals for scalable and hassle-free simulation-based inference
M Deistler, PJ Goncalves… - Advances in Neural …, 2022 - proceedings.neurips.cc
Simulation-based inference (SBI) solves statistical inverse problems by repeatedly running a
stochastic simulator and inferring posterior distributions from model-simulations. To improve …
stochastic simulator and inferring posterior distributions from model-simulations. To improve …
Interneuronal mechanisms of hippocampal theta oscillations in a full-scale model of the rodent CA1 circuit
The hippocampal theta rhythm plays important roles in information processing; however, the
mechanisms of its generation are not well understood. We developed a data-driven …
mechanisms of its generation are not well understood. We developed a data-driven …
KCNQ2/3 gain-of-function variants and cell excitability: differential effects in CA1 versus L2/3 pyramidal neurons
N Varghese, B Moscoso, A Chavez… - Journal of …, 2023 - Soc Neuroscience
Gain-of-function (GOF) pathogenic variants in the potassium channels KCNQ2 and KCNQ3
lead to hyperexcitability disorders such as epilepsy and autism spectrum disorders …
lead to hyperexcitability disorders such as epilepsy and autism spectrum disorders …