[HTML][HTML] Walnut: past and future of genetic improvement

A Bernard, F Lheureux, E Dirlewanger - Tree genetics & genomes, 2018 - Springer
Abstract Persian or English walnut (Juglans regia L.), the walnut species cultivated for nut
production, is one of the oldest food sources known. Persian walnuts, native to the mountain …

DNA‐based methods for the identification of commercial fish and seafood species

RS Rasmussen, MT Morrissey - … in food science and food safety, 2008 - Wiley Online Library
The detection of species substitution has become an important topic within the food industry
and there is a growing need for rapid, reliable, and reproducible tests to verify species in …

High-throughput functional annotation and data mining with the Blast2GO suite

S Götz, JM García-Gómez, J Terol… - Nucleic acids …, 2008 - academic.oup.com
Functional genomics technologies have been widely adopted in the biological research of
both model and non-model species. An efficient functional annotation of DNA or protein …

Blast2GO: a comprehensive suite for functional analysis in plant genomics

A Conesa, S Götz - International journal of plant genomics, 2008 - Wiley Online Library
Functional annotation of novel sequence data is a primary requirement for the utilization of
functional genomics approaches in plant research. In this paper, we describe the Blast2GO …

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine

L Kong, Y Zhang, ZQ Ye, XQ Liu, SQ Zhao… - Nucleic acids …, 2007 - academic.oup.com
Recent transcriptome studies have revealed that a large number of transcripts in mammals
and other organisms do not encode proteins but function as noncoding RNAs (ncRNAs) …

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

JC Vera, CW Wheat, HW Fescemyer… - Molecular …, 2008 - Wiley Online Library
We present a de novo assembly of a eukaryote transcriptome using 454 pyrosequencing
data. The Glanville fritillary butterfly (Melitaea cinxia; Lepidoptera: Nymphalidae) is a …

Multiple models for Rosaceae genomics

V Shulaev, SS Korban, B Sosinski, AG Abbott… - Plant …, 2008 - academic.oup.com
The plant family Rosaceae consists of over 100 genera and 3,000 species that include many
important fruit, nut, ornamental, and wood crops. Members of this family provide high-value …

[HTML][HTML] Potential for genetic improvement of sugarcane as a source of biomass for biofuels

NV Hoang, A Furtado, FC Botha… - … in bioengineering and …, 2015 - frontiersin.org
Sugarcane (Saccharum spp. hybrids) has great potential as a major feedstock for biofuel
production worldwide. It is considered among the best options for producing biofuels today …

[HTML][HTML] Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont

S Sunagawa, EC Wilson, M Thaler, ML Smith… - BMC genomics, 2009 - Springer
Background The most diverse marine ecosystems, coral reefs, depend upon a functional
symbiosis between cnidarian hosts and unicellular dinoflagellate algae. The molecular …

[HTML][HTML] Long read reference genome-free reconstruction of a full-length transcriptome from Astragalus membranaceus reveals transcript variants involved in bioactive …

J Li, Y Harata-Lee, MD Denton, Q Feng, JR Rathjen… - Cell discovery, 2017 - nature.com
Astragalus membranaceus, also known as Huangqi in China, is one of the most widely used
medicinal herbs in Traditional Chinese Medicine. Traditional Chinese Medicine formulations …