Lessons from the COVID-19 pandemic for advancing computational drug repurposing strategies
G Galindez, J Matschinske, TD Rose… - Nature Computational …, 2021 - nature.com
Responding quickly to unknown pathogens is crucial to stop uncontrolled spread of
diseases that lead to epidemics, such as the novel coronavirus, and to keep protective …
diseases that lead to epidemics, such as the novel coronavirus, and to keep protective …
Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review
P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …
methods and in rational drug design, the increase in approved drugs in the past decade did …
Controllability analysis of the directed human protein interaction network identifies disease genes and drug targets
A Vinayagam, TE Gibson, HJ Lee… - Proceedings of the …, 2016 - National Acad Sciences
The protein–protein interaction (PPI) network is crucial for cellular information processing
and decision-making. With suitable inputs, PPI networks drive the cells to diverse functional …
and decision-making. With suitable inputs, PPI networks drive the cells to diverse functional …
VirHostNet 2.0: surfing on the web of virus/host molecular interactions data
T Guirimand, S Delmotte, V Navratil - Nucleic acids research, 2015 - academic.oup.com
Abstract VirHostNet release 2.0 (http://virhostnet. prabi. fr) is a knowledgebase dedicated to
the network-based exploration of virus–host protein–protein interactions. Since the previous …
the network-based exploration of virus–host protein–protein interactions. Since the previous …
[HTML][HTML] Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health
Many essential biological processes including cell regulation and signalling are mediated
through the assembly of protein complexes. Changes to protein-protein interaction (PPI) …
through the assembly of protein complexes. Changes to protein-protein interaction (PPI) …
Protein–protein interactions in virus–host systems
To study virus–host protein interactions, knowledge about viral and host protein
architectures and repertoires, their particular evolutionary mechanisms, and information on …
architectures and repertoires, their particular evolutionary mechanisms, and information on …
VirusMentha: a new resource for virus-host protein interactions
A Calderone, L Licata, G Cesareni - Nucleic acids research, 2015 - academic.oup.com
Viral infections often cause diseases by perturbing several cellular processes in the infected
host. Viral proteins target host proteins and either form new complexes or modulate the …
host. Viral proteins target host proteins and either form new complexes or modulate the …
IRGM is a common target of RNA viruses that subvert the autophagy network
IP Grégoire, C Richetta, L Meyniel-Schicklin… - PLoS …, 2011 - journals.plos.org
Autophagy is a conserved degradative pathway used as a host defense mechanism against
intracellular pathogens. However, several viruses can evade or subvert autophagy to insure …
intracellular pathogens. However, several viruses can evade or subvert autophagy to insure …
HPIDB-a unified resource for host-pathogen interactions
Abstract Background Protein-protein interactions (PPIs) play a crucial role in initiating
infection in a host-pathogen system. Identification of these PPIs is important for …
infection in a host-pathogen system. Identification of these PPIs is important for …
Computational approaches for prediction of pathogen-host protein-protein interactions
Infectious diseases are still among the major and prevalent health problems, mostly
because of the drug resistance of novel variants of pathogens. Molecular interactions …
because of the drug resistance of novel variants of pathogens. Molecular interactions …