[HTML][HTML] ModEx: A text mining system for extracting mode of regulation of transcription factor-gene regulatory interaction

S Farahmand, T Riley, K Zarringhalam - Journal of Biomedical Informatics, 2020 - Elsevier
Abstract Background Transcription factors (TFs) are proteins that are fundamental to
transcription and regulation of gene expression. Each TF may regulate multiple genes and …

Relating Translation Efficiency to Protein Networks Provides Evolutionary Insights in Shewanella and Its Implications for Extracellular Electron Transfer

DW Ding, X Sun - IEEE/ACM transactions on computational …, 2020 - ieeexplore.ieee.org
Shewanella species are well-known for their extracellular electron transfer (EET) capacity,
by which these microorganisms can transfer the electrons from intracellular environment to …

[图书][B] Application of graphical models in protein-protein interactions and dynamics

AV Hoojghan - 2018 - search.proquest.com
Every organism contains a few hundred to thousands of proteins. A protein is made of a
sequence of molecular building blocks named amino acids. Amino acids will be referred to …

Comparison of Disease Specific Sub-Network Identification Programs

B Adanur, BB Gungor - 2018 3rd International Conference on …, 2018 - ieeexplore.ieee.org
Active sub-network search aims to identify a group of interconnected genes in a protein-
protein interaction network that contains most of the disease-associated genes. In recent …

Improving Analysis and Annotation of Microarray Data with Protein Interactions

M Kotlyar, SWH Wong, C Pastrello, I Jurisica - Microarray Data Analysis, 2022 - Springer
Gene expression microarrays are one of the most widely used high-throughput technologies
in molecular biology, with applications such as identification of disease mechanisms and …

Evaluation of Sub-Network search programs in epilepsy-related GWAS dataset

B Bakir Gungor, B Adanur Dedetürk - 2022 - openaccess.agu.edu.tr
The active sub-network detection aims to find a group of interconnected genes of disease-
related genes in a protein-protein interaction network. In recent years, several algorithms …

Evaluation of Sub-Network search programs in epilepsy-related GWAS dataset

BA Dedeturk, BB Gungor - Pamukkale Üniversitesi Mühendislik …, 2022 - dergipark.org.tr
The active sub-network detection aims to find a group of interconnected genes of disease-
related genes in a protein-protein interaction network. In recent years, several algorithms …

High Performance Computing Solutions to Problems on Coding Theory, Distance Learning, Mars Image Crater Detection and Cancer Structural Variations and …

H Mohebbi - 2020 - search.proquest.com
Over the past 20 years, data has increased on a large scale in various fields and
researchers are facing new challenges to work with this huge volume of data. My passion for …

[PDF][PDF] Evaluation of Sub-Network search programs in epilepsy-related GWAS dataset Epilepsi ile ilgili GWAS veri kümesinde alt ağ arama programlarının …

BA DEDETURK, BB GUNGOR - jag.journalagent.com
Öz The active sub-network detection aims to find a group of interconnected genes of disease-
related genes in a protein-protein interaction network. In recent years, several algorithms …

Application of Graphical Models in Protein-Protein Interactions and Dynamics

A Vajdi Hoojghan - 2018 - scholarworks.umb.edu
Every organism contains a few hundred to thousands of proteins. A protein is made of a
sequence of molecular building blocks named amino acids. Amino acids will be referred to …