Cre recombinase
GD Van Duyne - Mobile DNA III, 2015 - Wiley Online Library
The use of Cre recombinase to carry out conditional mutagenesis of transgenes and insert
DNA cassettes into eukaryotic chromosomes is widespread (1–9). Indeed, a PubMed search …
DNA cassettes into eukaryotic chromosomes is widespread (1–9). Indeed, a PubMed search …
A common topology for bacterial and eukaryotic transcription initiation?
A Travers, G Muskhelishvili - EMBO reports, 2007 - embopress.org
DNA supercoiling is a major regulator of transcription in bacteria. Negative supercoiling acts
both by promoting the formation of nucleoprotein structures containing wrapped DNA and by …
both by promoting the formation of nucleoprotein structures containing wrapped DNA and by …
Macrodomain organization of the Escherichia coli chromosome
M Valens, S Penaud, M Rossignol, F Cornet… - The EMBO …, 2004 - embopress.org
We have explored the Escherichia coli chromosome architecture by genetic dissection,
using a site‐specific recombination system that reveals the spatial proximity of distant DNA …
using a site‐specific recombination system that reveals the spatial proximity of distant DNA …
Preferential relaxation of positively supercoiled DNA by E. coli topoisomerase IV in single-molecule and ensemble measurements
NJ Crisona, TR Strick, D Bensimon… - Genes & …, 2000 - genesdev.cshlp.org
We show that positively supercoiled [(+) SC] DNA is the preferred substrate for Escherichia
coli topoisomerase IV (topo IV). We measured topo IV relaxation of (−) and (+) supercoils in …
coli topoisomerase IV (topo IV). We measured topo IV relaxation of (−) and (+) supercoils in …
Crystal structure of a Flp recombinase–Holliday junction complex: assembly of an active oligomer by helix swapping
Y Chen, U Narendra, LE Iype, MM Cox, PA Rice - Molecular cell, 2000 - cell.com
The crystal structure of a Flp recombinase tetramer bound to a Holliday junction intermediate
has been determined at 2.65 Å resolution. Only one of Flp's two domains, containing the …
has been determined at 2.65 Å resolution. Only one of Flp's two domains, containing the …
A structural basis for allosteric control of DNA recombination by λ integrase
T Biswas, H Aihara, M Radman-Livaja, D Filman… - Nature, 2005 - nature.com
Site-specific DNA recombination is important for basic cellular functions including viral
integration, control of gene expression, production of genetic diversity and segregation of …
integration, control of gene expression, production of genetic diversity and segregation of …
Studies of global and local entanglements of individual protein chains using the concept of knotoids
We study here global and local entanglements of open protein chains by implementing the
concept of knotoids. Knotoids have been introduced in 2012 by Vladimir Turaev as a …
concept of knotoids. Knotoids have been introduced in 2012 by Vladimir Turaev as a …
Spontaneous knotting and unknotting of flexible linear polymers: Equilibrium and kinetic aspects
We report on a computational study of the statics and dynamics of long flexible linear
polymers that spontaneously knot and unknot. Specifically, the equilibrium self …
polymers that spontaneously knot and unknot. Specifically, the equilibrium self …
The λ integrase site‐specific recombination pathway
A Landy - Mobile DNA III, 2015 - Wiley Online Library
The λ site‐specific recombination pathway has enjoyed the sequential attentions of
geneticists, biochemists, and structural biologists for more than 50 years. It has proven to be …
geneticists, biochemists, and structural biologists for more than 50 years. It has proven to be …
Conservation of writhe helicity under anti-parallel reconnection
CE Laing, RL Ricca, DWL Sumners - Scientific reports, 2015 - nature.com
Reconnection is a fundamental event in many areas of science, from the interaction of
vortices in classical and quantum fluids and magnetic flux tubes in magnetohydrodynamics …
vortices in classical and quantum fluids and magnetic flux tubes in magnetohydrodynamics …