Microbial communities and their enzymes facilitate degradation of recalcitrant polymers in anaerobic digestion

EM Blair, KL Dickson, MA O'Malley - Current Opinion in Microbiology, 2021 - Elsevier
Highlights•Microbial consortia are tools to break down recalcitrant carbon sources.•Several
carbohydrate active enzymes are known to hydrolyze biomass.•Emerging techniques are …

Directed evolution of microbial communities

Á Sánchez, JCC Vila, CY Chang… - Annual review of …, 2021 - annualreviews.org
Directed evolution is a form of artificial selection that has been used for decades to find
biomolecules and organisms with new or enhanced functional traits. Directed evolution can …

Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes

X Peng, SE Wilken, TS Lankiewicz, SP Gilmore… - Nature …, 2021 - nature.com
The herbivore digestive tract is home to a complex community of anaerobic microbes that
work together to break down lignocellulose. These microbiota are an untapped resource of …

An ecological explanation for carbon source-associated denitrification performance in wastewater treatment plants

X Wu, Z Yu, S Yuan, A Tawfik, F Meng - Water Research, 2023 - Elsevier
The underlying mechanism associated with the roles of dosed carbon source in
denitrification performance remains largely unknown. In this study, three denitrifying …

Daqu microbiota adaptability to altered temperature determines the formation of characteristic compounds

S Wu, H Du, Y Xu - International Journal of Food Microbiology, 2023 - Elsevier
Temperature plays a critical role in the performance of microbial communities during
traditional solid-state fermentation. However, it remains unknown how temperature shapes …

Engineering complex communities by directed evolution

CY Chang, JCC Vila, M Bender, R Li… - Nature ecology & …, 2021 - nature.com
Directed evolution has been used for decades to engineer biological systems at or below
the organismal level. Above the organismal level, a small number of studies have attempted …

Anaerobic fungi: past, present, and future

M Hess, SS Paul, AK Puniya… - Frontiers in …, 2020 - frontiersin.org
Anaerobic fungi (AF) play an essential role in feed conversion due to their potent fiber
degrading enzymes and invasive growth. Much has been learned about this unusual fungal …

[HTML][HTML] Toward merging bottom–up and top–down model-based designing of synthetic microbial communities

D San León, J Nogales - Current Opinion in Microbiology, 2022 - Elsevier
Highlights•Analysis and designing of microbiomes have become a new paradigm in
microbiology.•Understanding and rational engineering of microbiomes require model-based …

Construction of environmental synthetic microbial consortia: Based on engineering and ecological principles

Y Liang, A Ma, G Zhuang - Frontiers in Microbiology, 2022 - frontiersin.org
In synthetic biology, engineering principles are applied to system design. The development
of synthetic microbial consortia represents the intersection of synthetic biology and …

The anaerobic fungi: challenges and opportunities for industrial lignocellulosic biofuel production

LMG Saye, TA Navaratna, JPJ Chong, MA O'Malley… - Microorganisms, 2021 - mdpi.com
Lignocellulose is a promising feedstock for biofuel production as a renewable, carbohydrate-
rich and globally abundant source of biomass. However, challenges faced include …