Array programming with NumPy

CR Harris, KJ Millman, SJ Van Der Walt, R Gommers… - Nature, 2020 - nature.com
Array programming provides a powerful, compact and expressive syntax for accessing,
manipulating and operating on data in vectors, matrices and higher-dimensional arrays …

[HTML][HTML] SciPy 1.0: fundamental algorithms for scientific computing in Python

P Virtanen, R Gommers, TE Oliphant, M Haberland… - Nature …, 2020 - nature.com
SciPy is an open-source scientific computing library for the Python programming language.
Since its initial release in 2001, SciPy has become a de facto standard for leveraging …

[HTML][HTML] The NANOGrav 15 yr data set: Evidence for a gravitational-wave background

G Agazie, A Anumarlapudi, AM Archibald… - The Astrophysical …, 2023 - iopscience.iop.org
We report multiple lines of evidence for a stochastic signal that is correlated among 67
pulsars from the 15 yr pulsar timing data set collected by the North American Nanohertz …

The NANOGrav 15 yr data set: Observations and timing of 68 millisecond pulsars

G Agazie, MF Alam, A Anumarlapudi… - The Astrophysical …, 2023 - iopscience.iop.org
We present observations and timing analyses of 68 millisecond pulsars (MSPs) comprising
the 15 yr data set of the North American Nanohertz Observatory for Gravitational Waves …

Two remarkably luminous galaxy candidates at z≈ 10–12 revealed by JWST

RP Naidu, PA Oesch, P van Dokkum… - The Astrophysical …, 2022 - iopscience.iop.org
The first few 100 Myr at z> 10 mark the last major uncharted epoch in the history of the
universe, where only a single galaxy (GN-z11 at z≈ 11) is currently spectroscopically …

[HTML][HTML] Dynamic CD8+ T cell responses to cancer immunotherapy in human regional lymph nodes are disrupted in metastatic lymph nodes

MK Rahim, TLH Okholm, KB Jones, EE McCarthy… - Cell, 2023 - cell.com
CD8+ T cell responses are critical for anti-tumor immunity. While extensively profiled in the
tumor microenvironment, recent studies in mice identified responses in lymph nodes (LNs) …

[HTML][HTML] PyMC: a modern, and comprehensive probabilistic programming framework in Python

O Abril-Pla, V Andreani, C Carroll, L Dong… - PeerJ Computer …, 2023 - peerj.com
PyMC is a probabilistic programming library for Python that provides tools for constructing
and fitting Bayesian models. It offers an intuitive, readable syntax that is close to the natural …

CASA, the Common Astronomy Software Applications for radio astronomy

B Bean, S Bhatnagar, S Castro, JD Meyer… - Publications of the …, 2022 - iopscience.iop.org
Abstract CASA, the Common Astronomy Software Applications, is the primary data
processing software for the Atacama Large Millimeter/submillimeter Array (ALMA) and the …

Modules for experiments in stellar astrophysics (MESA): time-dependent convection, energy conservation, automatic differentiation, and infrastructure

AS Jermyn, EB Bauer, J Schwab… - The Astrophysical …, 2023 - iopscience.iop.org
We update the capabilities of the open-knowledge software instrument Modules for
Experiments in Stellar Astrophysics (MESA). The new auto _ diff module implements …

ColabFold: making protein folding accessible to all

M Mirdita, K Schütze, Y Moriwaki, L Heo… - Nature …, 2022 - nature.com
ColabFold offers accelerated prediction of protein structures and complexes by combining
the fast homology search of MMseqs2 with AlphaFold2 or RoseTTAFold. ColabFold's 40− 60 …