Phylogenomic analysis of the parrots of the world distinguishes artifactual from biological sources of gene tree discordance

BT Smith, J Merwin, KL Provost, G Thom… - Systematic …, 2023 - academic.oup.com
Gene tree discordance is expected in phylogenomic trees and biological processes are
often invoked to explain it. However, heterogeneous levels of phylogenetic signal among …

Geogenomic Predictors of Genetree Heterogeneity Explain Phylogeographic and Introgression History: A Case Study in an Amazonian Bird (Thamnophilus aethiops)

LJ Musher, G Del-Rio, RS Marcondes… - Systematic …, 2024 - academic.oup.com
Can knowledge about genome architecture inform biogeographic and phylogenetic
inference? Selection, drift, recombination, and gene flow interact to produce a genomic …

The role of biogeographical barriers on the historical dynamics of passerine birds with a circum‐Amazonian distribution

SD Bolívar‐Leguizamón, F Bocalini… - Ecology and …, 2024 - Wiley Online Library
Common distributional patterns have provided the foundations of our knowledge of
Neotropical biogeography. A distinctive pattern is the “circum‐Amazonian distribution” …

Recombination rate variation shapes genomic variability of phylogeographic structure in a widespread North American songbird (Aves: Certhia americana)

JD Manthey, GM Spellman - Molecular Phylogenetics and Evolution, 2024 - Elsevier
The nonrandom distribution of chromosomal characteristics and functional elements—
genomic architecture—impacts the relative strengths and impacts of population genetic …