Application of machine learning in microbiology
Microorganisms are ubiquitous and closely related to people's daily lives. Since they were
first discovered in the 19th century, researchers have shown great interest in …
first discovered in the 19th century, researchers have shown great interest in …
Positive-unlabeled learning in bioinformatics and computational biology: a brief review
Conventional supervised binary classification algorithms have been widely applied to
address significant research questions using biological and biomedical data. This …
address significant research questions using biological and biomedical data. This …
BioSeq-Analysis2. 0: an updated platform for analyzing DNA, RNA and protein sequences at sequence level and residue level based on machine learning …
B Liu, X Gao, H Zhang - Nucleic acids research, 2019 - academic.oup.com
As the first web server to analyze various biological sequences at sequence level based on
machine learning approaches, many powerful predictors in the field of computational …
machine learning approaches, many powerful predictors in the field of computational …
BioSeq-Analysis: a platform for DNA, RNA and protein sequence analysis based on machine learning approaches
B Liu - Briefings in bioinformatics, 2019 - academic.oup.com
With the avalanche of biological sequences generated in the post-genomic age, one of the
most challenging problems is how to computationally analyze their structures and functions …
most challenging problems is how to computationally analyze their structures and functions …
IDP-Seq2Seq: identification of intrinsically disordered regions based on sequence to sequence learning
YJ Tang, YH Pang, B Liu - Bioinformatics, 2020 - academic.oup.com
Motivation Related to many important biological functions, intrinsically disordered regions
(IDRs) are widely distributed in proteins. Accurate prediction of IDRs is critical for the protein …
(IDRs) are widely distributed in proteins. Accurate prediction of IDRs is critical for the protein …
BioSeq-Diabolo: biological sequence similarity analysis using Diabolo
H Li, B Liu - PLoS computational biology, 2023 - journals.plos.org
As the key for biological sequence structure and function prediction, disease diagnosis and
treatment, biological sequence similarity analysis has attracted more and more attentions …
treatment, biological sequence similarity analysis has attracted more and more attentions …
DeepSVM-fold: protein fold recognition by combining support vector machines and pairwise sequence similarity scores generated by deep learning networks
B Liu, CC Li, K Yan - Briefings in bioinformatics, 2020 - academic.oup.com
Protein fold recognition is critical for studying the structures and functions of proteins. The
existing protein fold recognition approaches failed to efficiently calculate the pairwise …
existing protein fold recognition approaches failed to efficiently calculate the pairwise …
Best match: new relevance search for PubMed
N Fiorini, K Canese, G Starchenko, E Kireev, W Kim… - PLoS …, 2018 - journals.plos.org
PubMed is a free search engine for biomedical literature accessed by millions of users from
around the world each day. With the rapid growth of biomedical literature—about two articles …
around the world each day. With the rapid growth of biomedical literature—about two articles …
NerLTR-DTA: drug–target binding affinity prediction based on neighbor relationship and learning to rank
Motivation Drug–target interaction prediction plays an important role in new drug discovery
and drug repurposing. Binding affinity indicates the strength of drug–target interactions …
and drug repurposing. Binding affinity indicates the strength of drug–target interactions …
A brief survey of machine learning methods in protein sub-Golgi localization
Background: The location of proteins in a cell can provide important clues to their functions
in various biological processes. Thus, the application of machine learning method in the …
in various biological processes. Thus, the application of machine learning method in the …