Metal ion modeling using classical mechanics
P Li, KM Merz Jr - Chemical reviews, 2017 - ACS Publications
Metal ions play significant roles in numerous fields including chemistry, geochemistry,
biochemistry, and materials science. With computational tools increasingly becoming …
biochemistry, and materials science. With computational tools increasingly becoming …
Molecular modeling insights into the structure and behavior of integrins: A review
I Tvaroška, S Kozmon, J Kóňa - Cells, 2023 - mdpi.com
Integrins are heterodimeric glycoproteins crucial to the physiology and pathology of many
biological functions. As adhesion molecules, they mediate immune cell trafficking, migration …
biological functions. As adhesion molecules, they mediate immune cell trafficking, migration …
The ReaxFF reactive force-field: development, applications and future directions
The reactive force-field (ReaxFF) interatomic potential is a powerful computational tool for
exploring, developing and optimizing material properties. Methods based on the principles …
exploring, developing and optimizing material properties. Methods based on the principles …
Atomic-scale insight into the pyrolysis of polycarbonate by ReaxFF-based reactive molecular dynamics simulation
The isothermal pyrolysis behavior of bisphenol-A polycarbonate under anoxic conditions at
different temperatures was studied by using molecular dynamics simulations with a reactive …
different temperatures was studied by using molecular dynamics simulations with a reactive …
Recent advances for improving the accuracy, transferability, and efficiency of reactive force fields
Reactive force fields provide an affordable model for simulating chemical reactions at a
fraction of the cost of quantum mechanical approaches. However, classically accounting for …
fraction of the cost of quantum mechanical approaches. However, classically accounting for …
QM/Classical modeling of surface enhanced Raman scattering based on atomistic electromagnetic models
We present quantum mechanics (QM)/frequency dependent fluctuating charge (QM/ωFQ)
and fluctuating dipoles (QM/ωFQFμ) multiscale approaches to model surface-enhanced …
and fluctuating dipoles (QM/ωFQFμ) multiscale approaches to model surface-enhanced …
Improvement of the ReaxFF description for functionalized hydrocarbon/water weak interactions in the condensed phase
W Zhang, ACT Van Duin - The Journal of Physical Chemistry B, 2018 - ACS Publications
The ReaxFF protein reactive force field (protein-2013) has been successfully employed to
simulate the biomolecules and membrane fuel cells, but it inaccurately describes the weak …
simulate the biomolecules and membrane fuel cells, but it inaccurately describes the weak …
Interaction mechanism of supercritical CO2 with shales and a new quantitative storage capacity evaluation method
X Dai, C Wei, M Wang, R Ma, Y Song, J Zhang, X Wang… - Energy, 2023 - Elsevier
Geochemical interactions between shale and supercritical carbon dioxide (scCO 2) may
dominate CO 2 storage in shale gas reservoirs by changing the brine chemistry and rock …
dominate CO 2 storage in shale gas reservoirs by changing the brine chemistry and rock …
Development, applications and challenges of ReaxFF reactive force field in molecular simulations
As an advanced and new technology in molecular simulation fields, ReaxFF reactive force
field has been developed and widely applied during the last two decades. ReaxFF bridges …
field has been developed and widely applied during the last two decades. ReaxFF bridges …
Characterising flame-retardant mechanism of phosphorous-containing intumescent coating on polyethylene via ReaxFF MD simulations
Localised flame-retardant (FR) chemistry of polymer composites is complex, versatile and
microscopic depending on the combination of polymer matrix and various FR systems …
microscopic depending on the combination of polymer matrix and various FR systems …