Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

Animal domestication in the era of ancient genomics

LAF Frantz, DG Bradley, G Larson… - Nature Reviews Genetics, 2020 - nature.com
The domestication of animals led to a major shift in human subsistence patterns, from a
hunter–gatherer to a sedentary agricultural lifestyle, which ultimately resulted in the …

Parallel subgenome structure and divergent expression evolution of allo-tetraploid common carp and goldfish

JT Li, Q Wang, MD Huang Yang, QS Li, MS Cui… - Nature Genetics, 2021 - nature.com
How two subgenomes in allo-tetraploids adapt to coexistence and coordinate through
structure and expression evolution requires extensive studies. In the present study, we …

The transcription factor bZIP68 negatively regulates cold tolerance in maize

Z Li, D Fu, X Wang, R Zeng, X Zhang, J Tian… - The Plant …, 2022 - academic.oup.com
Maize (Zea mays) originated in tropical areas and is thus susceptible to low temperatures,
which pose a major threat to maize production. Our understanding of the molecular basis of …

Disentangling domestication from food production systems in the Neotropics

CR Clement, A Casas, FA Parra-Rondinel, C Levis… - Quaternary, 2021 - mdpi.com
The Neolithic Revolution narrative associates early-mid Holocene domestications with the
development of agriculture that fueled the rise of late Holocene civilizations. This narrative …

Emerging evidence of plant domestication as a landscape-level process

RG Allaby, CJ Stevens, L Kistler, DQ Fuller - Trends in ecology & evolution, 2022 - cell.com
The evidence from ancient crops over the past decade challenges some of our most basic
assumptions about the process of domestication. The emergence of crops has been viewed …

Plant domestication and agricultural ecologies

DQ Fuller, T Denham, R Allaby - Current Biology, 2023 - cell.com
Plant life defines the environments to which animals adapt and provides the basis of food
webs. This was equally true for hunter-gatherer economies of ancestral humans, yet through …

The domestication syndrome in vegetatively propagated field crops

T Denham, H Barton, C Castillo, A Crowther… - Annals of …, 2020 - academic.oup.com
Background Vegetatively propagated crops are globally significant in terms of current
agricultural production, as well as for understanding the long-term history of early agriculture …

Population-genomic analyses reveal bottlenecks and asymmetric introgression from Persian into iron walnut during domestication

YM Ding, Y Cao, WP Zhang, J Chen, J Liu, P Li… - Genome biology, 2022 - Springer
Abstract Background Persian walnut, Juglans regia, occurs naturally from Greece to western
China, while its closest relative, the iron walnut, Juglans sigillata, is endemic in southwest …

Getting back to nature: feralization in animals and plants

E Gering, D Incorvaia, R Henriksen, J Conner… - Trends in Ecology & …, 2019 - cell.com
Formerly domesticated organisms and artificially selected genes often escape controlled
cultivation, but their subsequent evolution is not well studied. In this review, we examine …