Loop dynamics and the evolution of enzyme activity
In the early 2000s, Tawfik presented his 'New View'on enzyme evolution, highlighting the
role of conformational plasticity in expanding the functional diversity of limited repertoires of …
role of conformational plasticity in expanding the functional diversity of limited repertoires of …
NMR characterization of the dynamics of biomacromolecules
AG Palmer III - Chemical reviews, 2004 - ACS Publications
Function in biological systems is exquisitely dependent on spatial and temporal changes in
biomacromolecules. Innumerable biological processes ultimately rely on transduction of …
biomacromolecules. Innumerable biological processes ultimately rely on transduction of …
Intrinsic dynamics of an enzyme underlies catalysis
EZ Eisenmesser, O Millet, W Labeikovsky… - Nature, 2005 - nature.com
A unique feature of chemical catalysis mediated by enzymes is that the catalytically reactive
atoms are embedded within a folded protein. Although current understanding of enzyme …
atoms are embedded within a folded protein. Although current understanding of enzyme …
Enzyme dynamics during catalysis
EZ Eisenmesser, DA Bosco, M Akke, D Kern - Science, 2002 - science.org
Internal protein dynamics are intimately connected to enzymatic catalysis. However, enzyme
motions linked to substrate turnover remain largely unknown. We have studied dynamics of …
motions linked to substrate turnover remain largely unknown. We have studied dynamics of …
[HTML][HTML] Gates of enzymes
Enzymes are very efficient catalysts that are essential for the functioning of living organisms.
The low efficiency of biocatalysts produced de novo relative to those that have evolved …
The low efficiency of biocatalysts produced de novo relative to those that have evolved …
An NMR perspective on enzyme dynamics
Enzyme catalysis is an inherently dynamic process. Binding and release of ligands is often
accompanied by conformational changes, both subtle and dramatic (reviewed more …
accompanied by conformational changes, both subtle and dramatic (reviewed more …
Ab initio quantum chemical and mixed quantum mechanics/molecular mechanics (QM/MM) methods for studying enzymatic catalysis
RA Friesner, V Guallar - Annu. Rev. Phys. Chem., 2005 - annualreviews.org
▪ Abstract We describe large scale ab initio quantum chemical and mixed quantum
mechanics/molecular mechanics (QM/MM) methods for studying enzymatic reactions. First …
mechanics/molecular mechanics (QM/MM) methods for studying enzymatic reactions. First …
Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair
M Wolf-Watz, V Thai, K Henzler-Wildman… - Nature structural & …, 2004 - nature.com
A fundamental question is how enzymes can accelerate chemical reactions. Catalysis is not
only defined by actual chemical steps, but also by enzyme structure and dynamics. To …
only defined by actual chemical steps, but also by enzyme structure and dynamics. To …
Current applications of 19F NMR to studies of protein structure and dynamics
JL Kitevski-LeBlanc, RS Prosser - Progress in nuclear magnetic resonance …, 2012 - Elsevier
While traditional 1H, 13C, and 15N (HCN) solution state NMR protocols provide a wealth of
data on protein structure and dynamics, 19F NMR provides a unique perspective of …
data on protein structure and dynamics, 19F NMR provides a unique perspective of …
A new spin on protein dynamics
L Columbus, WL Hubbell - Trends in biochemical sciences, 2002 - cell.com
Site-directed spin labeling is a general method for investigating structure and conformational
switching in soluble and membrane proteins. It will also be an important tool for exploring …
switching in soluble and membrane proteins. It will also be an important tool for exploring …