Strategies for achieving high-level expression of genes in Escherichia coli

SC Makrides - Microbiological reviews, 1996 - Am Soc Microbiol
Progress in our understanding of several biological processes promises to broaden the
usefulness of Escherichia coli as a tool for gene expression. There is an expanding choice …

Structure, function and regulation of the DNA‐binding protein Dps and its role in acid and oxidative stress resistance in Escherichia coli: a review

LN Calhoun, YM Kwon - Journal of applied microbiology, 2011 - academic.oup.com
Dps, the DNA‐binding protein from starved cells, is capable of providing protection to cells
during exposure to severe environmental assaults; including oxidative stress and nutritional …

NAD captureSeq indicates NAD as a bacterial cap for a subset of regulatory RNAs

H Cahová, ML Winz, K Höfer, G Nübel, A Jäschke - Nature, 2015 - nature.com
A distinctive feature of prokaryotic gene expression is the absence of 5′-capped RNA. In
eukaryotes, 5′, 5′-triphosphate-linked 7-methylguanosine protects messenger RNA from …

The dps promoter is activated by OxyR during growth and by IHF and σs in stationary phase

S Altuvia, M Almiron, G Huisman, R Kolter… - Molecular …, 1994 - Wiley Online Library
Dps is a non‐specific DNA‐binding protein abundant In starved Escherichia coli cells and is
important for the defence against hydrogen peroxide. We found that dps mRNA levels are …

Identity and function of a large gene network underlying mutagenic repair of DNA breaks

AAM Al Mamun, MJ Lombardo, C Shee, AM Lisewski… - Science, 2012 - science.org
Mechanisms of DNA repair and mutagenesis are defined on the basis of relatively few
proteins acting on DNA, yet the identities and functions of all proteins required are unknown …

The hydrogenases and formate dehydrogenases ofEscherichia coli

G Sawers - Antonie Van Leeuwenhoek, 1994 - Springer
Escherichia coli has the capacity to synthesise three distinct formate dehydrogenase
isoenzymes and three hydrogenase isoenzymes. All six are multisubunit, membrane …

Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom

HM Amemiya, J Schroeder, PL Freddolino - Transcription, 2021 - Taylor & Francis
Genome architecture has proven to be critical in determining gene regulation across almost
all domains of life. While many of the key components and mechanisms of eukaryotic …

Impact of gyrA and parCMutations on Quinolone Resistance, Doubling Time, and Supercoiling Degree of Escherichia coli

S Bagel, V Hüllen, B Wiedemann… - Antimicrobial agents and …, 1999 - Am Soc Microbiol
Isogenic mutants derived from quinolone-susceptible isolate WT by introducing gyrA (S83L,
D87G) and parC (S80I, E84K) mutations associated with quinolone resistance were …

The regulation of transcription initiation by integration host factor

N Goosen, P Van de Putte - Molecular microbiology, 1995 - Wiley Online Library
Integration host factor (IHF) of Escherichia coli is an asymmetric histone‐like protein that
binds and bends the DNA at specific sequences. IHF functions as an accessory factor in a …

Simulation of prokaryotic genetic circuits

HH McAdams, A Arkin - Annual review of biophysics and …, 1998 - annualreviews.org
▪ Abstract Biochemical and genetic approaches have identified the molecular mechanisms
of many genetic reactions, particularly in bacteria. Now a comparably detailed …